Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   NX08_RS16010 Genome accession   NZ_CP034657
Coordinates   3459365..3459766 (-) Length   133 a.a.
NCBI ID   WP_005913706.1    Uniprot ID   A0AAI7ZH35
Organism   Xanthomonas vasicola strain NCPPB 902     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3454365..3464766
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NX08_RS15995 (NX08_015995) - 3456380..3458416 (-) 2037 WP_010364223.1 methyl-accepting chemotaxis protein -
  NX08_RS16000 (NX08_016000) - 3458456..3458986 (-) 531 WP_003482487.1 chemotaxis protein CheW -
  NX08_RS16005 (NX08_016005) - 3458986..3459348 (-) 363 WP_010375173.1 response regulator -
  NX08_RS16010 (NX08_016010) pilG 3459365..3459766 (-) 402 WP_005913706.1 twitching motility response regulator PilG Regulator
  NX08_RS16015 (NX08_016015) gshB 3460003..3460953 (+) 951 WP_010364206.1 glutathione synthase -
  NX08_RS16020 (NX08_016020) - 3460950..3461825 (+) 876 WP_039442686.1 energy transducer TonB -
  NX08_RS16025 (NX08_016025) - 3462128..3463042 (-) 915 WP_010364201.1 ADP-ribosylglycohydrolase family protein -
  NX08_RS16030 (NX08_016030) tsaB 3463039..3463758 (-) 720 WP_010375169.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14667.03 Da        Isoelectric Point: 6.9539

>NTDB_id=332166 NX08_RS16010 WP_005913706.1 3459365..3459766(-) (pilG) [Xanthomonas vasicola strain NCPPB 902]
MSENIAAGGELAGLKVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK
GNQLFKSTPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLSAIRTYVHA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=332166 NX08_RS16010 WP_005913706.1 3459365..3459766(-) (pilG) [Xanthomonas vasicola strain NCPPB 902]
ATGAGTGAAAACATTGCTGCGGGTGGGGAACTCGCAGGACTGAAGGTGATGGTGATCGATGATTCGAAGACCATTCGCCG
CACCGCCGAAACGCTGCTGAAGCGGGAAGGTTGTGAAGTAGTGACAGCAACGGATGGTTTCGAGGCACTGGCCAAAATTG
CGGACCAGCAACCTCAAATCATTTTTGTCGACATCATGATGCCGCGCCTGGATGGGTACCAGACGTGCGCGTTGATCAAG
GGCAACCAGCTCTTCAAATCGACGCCGGTGATCATGTTGTCGTCCAAAGATGGCCTGTTCGACAAGGCGCGCGGCCGCAT
CGTCGGTTCCGAGCAATATCTGACCAAGCCGTTCACCCGCGAAGAACTACTGAGCGCGATCCGCACGTACGTCCACGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75.207

90.977

0.684

Multiple sequence alignment