Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   NX80_RS08405 Genome accession   NZ_CP034653
Coordinates   1817255..1817656 (+) Length   133 a.a.
NCBI ID   WP_005913706.1    Uniprot ID   A0AAI7ZH35
Organism   Xanthomonas vasicola pv. arecae strain NCPPB 2649     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 1812255..1822656
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NX80_RS08385 (NX80_008385) tsaB 1813256..1813975 (+) 720 WP_010375169.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -
  NX80_RS08390 (NX80_008390) - 1813972..1814886 (+) 915 WP_047698448.1 ADP-ribosylglycohydrolase family protein -
  NX80_RS08395 (NX80_008395) - 1815189..1816064 (-) 876 WP_039442686.1 energy transducer TonB -
  NX80_RS08400 (NX80_008400) gshB 1816061..1817011 (-) 951 WP_126925245.1 glutathione synthase -
  NX80_RS08405 (NX80_008405) pilG 1817255..1817656 (+) 402 WP_005913706.1 twitching motility response regulator PilG Regulator
  NX80_RS08410 (NX80_008410) - 1817673..1818035 (+) 363 WP_010375173.1 response regulator -
  NX80_RS08415 (NX80_008415) - 1818035..1818565 (+) 531 WP_010364221.1 chemotaxis protein CheW -
  NX80_RS08420 (NX80_008420) - 1818605..1820641 (+) 2037 WP_047698450.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14667.03 Da        Isoelectric Point: 6.9539

>NTDB_id=332130 NX80_RS08405 WP_005913706.1 1817255..1817656(+) (pilG) [Xanthomonas vasicola pv. arecae strain NCPPB 2649]
MSENIAAGGELAGLKVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK
GNQLFKSTPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLSAIRTYVHA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=332130 NX80_RS08405 WP_005913706.1 1817255..1817656(+) (pilG) [Xanthomonas vasicola pv. arecae strain NCPPB 2649]
ATGAGTGAAAACATTGCTGCGGGTGGGGAACTCGCAGGACTGAAGGTGATGGTGATCGATGATTCGAAGACCATTCGCCG
CACCGCCGAAACGCTGCTGAAGCGGGAAGGTTGTGAAGTAGTGACAGCAACGGATGGTTTCGAGGCACTGGCCAAAATTG
CGGACCAGCAACCTCAAATCATTTTTGTCGACATCATGATGCCGCGCCTGGATGGGTACCAGACGTGCGCGTTGATCAAG
GGCAACCAGCTCTTCAAATCGACGCCGGTGATCATGTTGTCGTCCAAAGATGGCCTGTTCGACAAGGCGCGCGGCCGCAT
CGTCGGTTCCGAGCAATATCTGACCAAGCCGTTCACCCGCGAAGAACTACTGAGCGCGATCCGCACGTACGTCCACGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75.207

90.977

0.684

Multiple sequence alignment