Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   NX81_RS07385 Genome accession   NZ_CP034649
Coordinates   1575058..1575459 (+) Length   133 a.a.
NCBI ID   WP_005913706.1    Uniprot ID   A0AAI7ZH35
Organism   Xanthomonas vasicola strain NCPPB 1060     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 1570058..1580459
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NX81_RS07365 (NX81_007365) tsaB 1571067..1571786 (+) 720 WP_039431050.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -
  NX81_RS07370 (NX81_007370) - 1571783..1572697 (+) 915 WP_039431048.1 ADP-ribosylglycohydrolase family protein -
  NX81_RS07375 (NX81_007375) - 1572999..1573874 (-) 876 WP_039431046.1 energy transducer TonB -
  NX81_RS07380 (NX81_007380) gshB 1573871..1574821 (-) 951 WP_010364206.1 glutathione synthase -
  NX81_RS07385 (NX81_007385) pilG 1575058..1575459 (+) 402 WP_005913706.1 twitching motility response regulator PilG Regulator
  NX81_RS07390 (NX81_007390) - 1575477..1575839 (+) 363 WP_010375173.1 response regulator -
  NX81_RS07395 (NX81_007395) - 1575839..1576369 (+) 531 WP_003482487.1 chemotaxis protein CheW -
  NX81_RS07400 (NX81_007400) - 1576409..1578445 (+) 2037 WP_039431043.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14667.03 Da        Isoelectric Point: 6.9539

>NTDB_id=332105 NX81_RS07385 WP_005913706.1 1575058..1575459(+) (pilG) [Xanthomonas vasicola strain NCPPB 1060]
MSENIAAGGELAGLKVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK
GNQLFKSTPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLSAIRTYVHA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=332105 NX81_RS07385 WP_005913706.1 1575058..1575459(+) (pilG) [Xanthomonas vasicola strain NCPPB 1060]
ATGAGTGAAAACATTGCTGCGGGTGGGGAACTCGCAGGACTGAAGGTGATGGTGATCGATGATTCGAAGACCATTCGCCG
CACCGCCGAAACGCTGCTGAAGCGGGAAGGTTGTGAAGTAGTGACAGCAACGGATGGTTTCGAGGCACTGGCCAAAATTG
CGGACCAGCAACCTCAAATCATTTTTGTCGACATCATGATGCCGCGCCTGGATGGGTACCAGACGTGCGCGTTGATCAAG
GGCAACCAGCTCTTCAAATCGACGCCGGTGATCATGTTGTCGTCCAAAGATGGCCTGTTCGACAAGGCGCGCGGCCGCAT
CGTCGGTTCCGAGCAATATCTGACCAAGCCGTTCACTCGCGAAGAACTACTGAGCGCGATCCGCACGTACGTCCACGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75.207

90.977

0.684

Multiple sequence alignment