Detailed information NTG0332018

Bioinformatically predicted

Overview

• Name: comFC
• Type: Machinery gene
• Locus tag: EJ992_RS18975
• Genome accession: NZ_CP034569
• Coordinates: 3623407..3624141 (-)
• Length: 244 a.a.
• NCBI ID: WP_011198352.1
• Uniprot ID: A0A415J866
• Organism: Bacillus licheniformis strain ATCC 14580
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3618407..3629141

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EJ992_RS18940 (EJ992_18935)	fliW	3618558..3618989 (-)	432	WP_011198351.1	flagellar assembly protein FliW	-
EJ992_RS18945 (EJ992_18940)	-	3619011..3619577 (-)	567	WP_009329670.1	DUF6470 family protein	-
EJ992_RS18950 (EJ992_18945)	flgL	3619627..3620538 (-)	912	WP_003185705.1	flagellar hook-associated protein FlgL	-
EJ992_RS18955 (EJ992_18950)	flgK	3620549..3622072 (-)	1524	WP_003185709.1	flagellar hook-associated protein FlgK	-
EJ992_RS18960 (EJ992_18955)	-	3622088..3622564 (-)	477	WP_003185711.1	flagellar protein FlgN	-
EJ992_RS18965 (EJ992_18960)	flgM	3622583..3622849 (-)	267	WP_003185713.1	flagellar biosynthesis anti-sigma factor FlgM	-
EJ992_RS18970 (EJ992_18965)	-	3622929..3623348 (-)	420	WP_003185715.1	TIGR03826 family flagellar region protein	-
EJ992_RS18975 (EJ992_18970)	comFC	3623407..3624141 (-)	735	WP_011198352.1	amidophosphoribosyltransferase	Machinery gene
EJ992_RS18980 (EJ992_18975)	-	3624098..3624382 (-)	285	WP_003185718.1	late competence development ComFB family protein	-
EJ992_RS18985 (EJ992_18980)	comFA	3624437..3625831 (-)	1395	WP_003185720.1	DEAD/DEAH box helicase	Machinery gene
EJ992_RS18990 (EJ992_18985)	-	3625952..3626794 (-)	843	WP_003185726.1	DegV family protein	-
EJ992_RS18995 (EJ992_18990)	degU	3626914..3627603 (-)	690	WP_003185730.1	two-component system response regulator DegU	Regulator
EJ992_RS19000 (EJ992_18995)	degS	3627685..3628842 (-)	1158	WP_003185733.1	sensor histidine kinase	Regulator

Sequence

Protein

• Length: 244 a.a.
• Molecular weight: 27811.22 Da
• Isoelectric Point: 9.4827

>NTDB_id=332018 EJ992_RS18975 WP_011198352.1 3623407..3624141(-) (comFC) [Bacillus licheniformis strain ATCC 14580]
MKTRFAQAIEEGGNKLNCLICAAPLLHSLSWHSFFFLRSEEKICRECKENFIEIKGTVCPKCGRPQGSEELCGDCAKWEA
NPLTRSLLRQNRSVYLYNTFMKEVLARFKFRGDAELVFAFAPSFISAFQQYFRRSPSVLVPIPLSEERKAERGFNQAERL
ASLLQIPVIHPLIRIENEKQSKKSRKERIKPKTVFRTEKGSVKNLDVILIDDLYTTGATLHHAADCLMTSGEAKSVSSYT
LIRS

Nucleotide

• Length: 735 bp

>NTDB_id=332018 EJ992_RS18975 WP_011198352.1 3623407..3624141(-) (comFC) [Bacillus licheniformis strain ATCC 14580]
ATGAAAACCCGCTTTGCGCAAGCAATCGAAGAGGGAGGGAATAAACTGAATTGTTTAATTTGTGCAGCGCCTCTTTTACA
TTCTCTCTCATGGCATTCTTTTTTCTTTTTACGATCAGAAGAGAAAATATGCAGGGAATGTAAAGAGAACTTTATCGAGA
TCAAAGGAACCGTATGCCCTAAGTGCGGACGGCCACAGGGGAGCGAAGAGCTGTGCGGTGACTGCGCAAAATGGGAGGCC
AATCCGTTAACCCGCTCTCTTTTGAGGCAAAACCGCTCTGTTTATCTCTACAATACTTTCATGAAAGAAGTCCTTGCCCG
TTTTAAGTTCAGAGGTGATGCTGAACTGGTCTTCGCTTTTGCCCCTTCATTTATCAGCGCTTTTCAACAATACTTCCGCC
GCAGCCCGTCTGTTTTAGTTCCGATACCTCTCAGTGAAGAACGTAAAGCGGAGAGGGGATTTAATCAGGCGGAGCGTCTT
GCTTCCTTATTACAAATACCCGTTATTCATCCCTTGATCAGAATCGAAAATGAAAAACAATCCAAAAAAAGCAGGAAAGA
GCGAATTAAGCCAAAAACCGTTTTTAGAACCGAAAAGGGGTCAGTAAAGAATCTGGATGTCATATTGATTGACGACTTGT
ATACGACAGGAGCGACCCTTCATCATGCCGCTGATTGCCTGATGACATCCGGAGAAGCAAAATCTGTATCATCATATACA
TTAATTAGAAGCTAA

Domains

Predicted by InterproScan.

• Phosphoribosyl transferase domain (Pribosyltran) (151-242)

• Double zinc ribbon domain (DZR_2) (17-76)

3D structure

• AlphaFold DB: A0A415J866

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFC	Bacillus subtilis subsp. subtilis str. 168	52.321	97.131	0.508