Detailed information
Bioinformatically predicted
Overview
| Name | nucA/comI | Type | Machinery gene |
| Locus tag | EJ992_RS10260 | Genome accession | NZ_CP034569 |
| Coordinates | 1992401..1992829 (+) | Length | 142 a.a. |
| NCBI ID | WP_003182220.1 | Uniprot ID | A0A1Y0YFI7 |
| Organism | Bacillus licheniformis strain ATCC 14580 | ||
| Function | cleavage of dsDNA into ssDNA (predicted from homology) DNA processing |
||
Genomic Context
Location: 1987401..1997829
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EJ992_RS10235 (EJ992_10235) | - | 1987583..1988191 (+) | 609 | WP_009328237.1 | flavin reductase family protein | - |
| EJ992_RS10240 (EJ992_10240) | wrbA | 1988393..1989004 (+) | 612 | WP_011198006.1 | NAD(P)H:quinone oxidoreductase | - |
| EJ992_RS22010 | - | 1989325..1989465 (+) | 141 | WP_003182211.1 | hypothetical protein | - |
| EJ992_RS10245 (EJ992_10245) | - | 1989458..1990291 (+) | 834 | WP_003182213.1 | prohibitin family protein | - |
| EJ992_RS10250 (EJ992_10250) | - | 1990382..1991143 (+) | 762 | WP_003182215.1 | hypothetical protein | - |
| EJ992_RS10255 (EJ992_10255) | - | 1991203..1992042 (+) | 840 | WP_003182218.1 | thymidylate synthase | - |
| EJ992_RS10260 (EJ992_10260) | nucA/comI | 1992401..1992829 (+) | 429 | WP_003182220.1 | NucA/NucB deoxyribonuclease domain-containing protein | Machinery gene |
| EJ992_RS10265 (EJ992_10265) | lexA | 1993025..1993648 (-) | 624 | WP_003182222.1 | transcriptional repressor LexA | - |
| EJ992_RS10270 (EJ992_10270) | yneA | 1993801..1994112 (+) | 312 | WP_003182225.1 | cell division suppressor protein YneA | - |
| EJ992_RS10275 (EJ992_10275) | - | 1994131..1994778 (+) | 648 | WP_003182227.1 | YneB family resolvase-like protein | - |
| EJ992_RS10280 (EJ992_10280) | - | 1994844..1995077 (+) | 234 | WP_003182231.1 | DUF896 domain-containing protein | - |
| EJ992_RS10285 (EJ992_10285) | tkt | 1995244..1997247 (+) | 2004 | WP_009328229.1 | transketolase | - |
Sequence
Protein
Download Length: 142 a.a. Molecular weight: 15332.29 Da Isoelectric Point: 7.8987
>NTDB_id=331993 EJ992_RS10260 WP_003182220.1 1992401..1992829(+) (nucA/comI) [Bacillus licheniformis strain ATCC 14580]
MIKKWAVHLLFSALVLLGLSGGAAYSPQHAEGAARYDDILYFPASRYPETGAHISDAIKAGHSDVCTIERSGADKRRQES
LKGIPTKPGFDRDEWPMAMCEEGGKGASVRYVSSSDNRGAGSWVGNRLSGFADGTRILFIVQ
MIKKWAVHLLFSALVLLGLSGGAAYSPQHAEGAARYDDILYFPASRYPETGAHISDAIKAGHSDVCTIERSGADKRRQES
LKGIPTKPGFDRDEWPMAMCEEGGKGASVRYVSSSDNRGAGSWVGNRLSGFADGTRILFIVQ
Nucleotide
Download Length: 429 bp
>NTDB_id=331993 EJ992_RS10260 WP_003182220.1 1992401..1992829(+) (nucA/comI) [Bacillus licheniformis strain ATCC 14580]
ATGATCAAAAAATGGGCGGTTCATCTGCTGTTTTCCGCATTGGTACTGCTTGGGCTTTCGGGAGGCGCCGCATATTCTCC
TCAGCATGCCGAAGGTGCTGCAAGGTATGACGACATATTGTATTTTCCGGCATCACGCTATCCCGAAACCGGCGCTCATA
TCAGCGACGCAATCAAAGCAGGGCATTCAGATGTCTGCACGATTGAAAGATCGGGAGCGGATAAGCGCCGCCAGGAATCA
CTGAAGGGGATTCCGACTAAGCCGGGCTTTGACCGTGACGAATGGCCGATGGCCATGTGTGAAGAAGGGGGCAAAGGAGC
GTCTGTCAGATATGTCAGCTCATCGGATAACCGCGGAGCCGGCTCCTGGGTCGGGAACAGGCTGAGCGGTTTCGCCGACG
GGACGAGAATTTTGTTTATCGTTCAATAA
ATGATCAAAAAATGGGCGGTTCATCTGCTGTTTTCCGCATTGGTACTGCTTGGGCTTTCGGGAGGCGCCGCATATTCTCC
TCAGCATGCCGAAGGTGCTGCAAGGTATGACGACATATTGTATTTTCCGGCATCACGCTATCCCGAAACCGGCGCTCATA
TCAGCGACGCAATCAAAGCAGGGCATTCAGATGTCTGCACGATTGAAAGATCGGGAGCGGATAAGCGCCGCCAGGAATCA
CTGAAGGGGATTCCGACTAAGCCGGGCTTTGACCGTGACGAATGGCCGATGGCCATGTGTGAAGAAGGGGGCAAAGGAGC
GTCTGTCAGATATGTCAGCTCATCGGATAACCGCGGAGCCGGCTCCTGGGTCGGGAACAGGCTGAGCGGTTTCGCCGACG
GGACGAGAATTTTGTTTATCGTTCAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| nucA/comI | Bacillus subtilis subsp. subtilis str. 168 |
58.73 |
88.732 |
0.521 |