Detailed information NTG0331987

Bioinformatically predicted

Overview

• Name: abrB
• Type: Regulator
• Locus tag: EJ992_RS08420
• Genome accession: NZ_CP034569
• Coordinates: 1639260..1639547 (+)
• Length: 95 a.a.
• NCBI ID: WP_003181383.1
• Uniprot ID: A0A1Y0YNS3
• Organism: Bacillus licheniformis strain ATCC 14580
• Function: repression of comK; repression of rok (predicted from homology) Competence regulation

Genomic Context

Location: 1634260..1644547

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EJ992_RS08400 (EJ992_08400)	-	1635906..1636280 (+)	375	WP_003181373.1	YybH family protein	-
EJ992_RS08405 (EJ992_08405)	-	1636418..1637650 (-)	1233	WP_011197946.1	aminopeptidase	-
EJ992_RS08410 (EJ992_08410)	-	1637741..1637872 (-)	132	WP_003181378.1	protein YkpC	-
EJ992_RS08415 (EJ992_08415)	mreBH	1637946..1638953 (-)	1008	WP_003181381.1	rod-share determining protein MreBH	-
EJ992_RS08420 (EJ992_08420)	abrB	1639260..1639547 (+)	288	WP_003181383.1	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	Regulator
EJ992_RS08425 (EJ992_08425)	-	1639715..1641052 (+)	1338	WP_011197947.1	ATP-binding protein	-
EJ992_RS08430 (EJ992_08430)	-	1641117..1641779 (+)	663	WP_003181388.1	potassium channel family protein	-
EJ992_RS08435 (EJ992_08435)	ade	1641907..1643628 (+)	1722	WP_011197948.1	adenine deaminase	-

Sequence

Protein

• Length: 95 a.a.
• Molecular weight: 10554.41 Da
• Isoelectric Point: 6.9823

>NTDB_id=331987 EJ992_RS08420 WP_003181383.1 1639260..1639547(+) (abrB) [Bacillus licheniformis strain ATCC 14580]
MKAIGVVRKVDELGRIVMPIELRRALDISIKDSIEFFVDQDKIVLKKYKPHGVCLMTGEITSENREYGNGKITLSPEGAE
LLLEEIKAALNGVKA

Nucleotide

• Length: 288 bp

>NTDB_id=331987 EJ992_RS08420 WP_003181383.1 1639260..1639547(+) (abrB) [Bacillus licheniformis strain ATCC 14580]
TTGAAAGCAATAGGAGTTGTGAGAAAAGTAGACGAACTCGGCAGGATCGTGATGCCGATTGAATTGAGAAGAGCTTTGGA
TATCTCGATCAAGGACAGCATCGAATTCTTTGTCGACCAAGATAAAATCGTCCTGAAAAAATATAAACCGCACGGTGTGT
GTCTGATGACCGGTGAAATCACTTCTGAAAACCGCGAGTATGGAAACGGGAAAATTACGCTCAGTCCTGAAGGGGCCGAA
TTGCTTTTGGAAGAAATCAAAGCTGCCTTAAACGGAGTGAAAGCATAA

Domains

Predicted by InterproScan.

• AbrB C-terminal domain (AbrB_C) (53-88)

• Antidote-toxin recognition MazE, bacterial antitoxin (MazE_antitoxin) (8-51)

3D structure

• AlphaFold DB: A0A1Y0YNS3

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
abrB	Bacillus subtilis subsp. subtilis str. 168	54.255	98.947	0.537