Detailed information    

insolico Bioinformatically predicted

Overview

Name   recR   Type   Machinery gene
Locus tag   FVE23_RS05745 Genome accession   NZ_CP042843
Coordinates   1200468..1201073 (+) Length   201 a.a.
NCBI ID   WP_001195025.1    Uniprot ID   P0A7H7
Organism   Escherichia coli strain JME67     
Function   promote later steps in plasmid transformation (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1195468..1206073
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FVE23_RS05715 rsmS 1196173..1196334 (-) 162 WP_000051153.1 pleiotropic regulatory protein RsmS -
  FVE23_RS05720 priC 1196348..1196875 (-) 528 WP_000844874.1 primosomal replication protein N'' -
  FVE23_RS05725 ybaN 1196945..1197322 (+) 378 WP_001188905.1 DUF454 family protein -
  FVE23_RS05730 apt 1197475..1198026 (+) 552 WP_000127356.1 adenine phosphoribosyltransferase -
  FVE23_RS05735 dnaX 1198155..1200086 (+) 1932 WP_000122013.1 DNA polymerase III subunit gamma/tau -
  FVE23_RS05740 ybaB 1200139..1200468 (+) 330 WP_000467098.1 YbaB/EbfC family nucleoid-associated protein -
  FVE23_RS05745 recR 1200468..1201073 (+) 606 WP_001195025.1 recombination mediator RecR Machinery gene
  FVE23_RS05750 htpG 1201183..1203057 (+) 1875 WP_000678201.1 molecular chaperone HtpG -
  FVE23_RS05755 adk 1203238..1203882 (+) 645 WP_001220233.1 adenylate kinase -
  FVE23_RS05765 hemH 1204118..1205080 (+) 963 WP_001250103.1 ferrochelatase -
  FVE23_RS05770 aes 1205077..1206036 (-) 960 WP_000801813.1 acetyl esterase -

Sequence

Protein


Download         Length: 201 a.a.        Molecular weight: 21963.00 Da        Isoelectric Point: 4.9097

>NTDB_id=331981 FVE23_RS05745 WP_001195025.1 1200468..1201073(+) (recR) [Escherichia coli strain JME67]
MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQEVCNICSNPRRQEN
GQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAEL
CAQYDVEASRIAHGVPVGGELEMVDGTTLSHSLAGRHKIRF

Nucleotide


Download         Length: 606 bp        

>NTDB_id=331981 FVE23_RS05745 WP_001195025.1 1200468..1201073(+) (recR) [Escherichia coli strain JME67]
ATGCAAACCAGCCCGCTGTTAACACAGCTTATGGAAGCACTGCGCTGTCTGCCGGGCGTTGGCCCGAAGTCGGCGCAGCG
TATGGCGTTCACGCTGCTTCAGCGCGATCGTAGCGGCGGGATGCGTCTGGCGCAGGCGCTCACCCGGGCGATGTCGGAAA
TCGGCCACTGCGCCGATTGCCGCACTTTCACCGAACAGGAAGTCTGTAACATCTGTTCGAATCCGCGTCGTCAGGAAAAC
GGTCAAATCTGCGTGGTGGAGAGTCCGGCGGACATCTACGCCATTGAGCAGACGGGGCAGTTTTCAGGTCGTTATTTTGT
GTTGATGGGGCATCTGTCACCGCTGGACGGCATCGGTCCGGATGATATCGGGCTTGATCGTCTGGAACAGCGTCTGGCAG
AGGAAAAAATCACTGAAGTGATCCTCGCCACCAACCCCACGGTTGAAGGTGAAGCTACCGCTAACTACATTGCCGAGCTT
TGCGCGCAATATGACGTGGAAGCCAGCCGAATCGCTCATGGCGTTCCGGTTGGCGGCGAGCTGGAAATGGTCGACGGCAC
CACGTTGTCACACTCCCTTGCCGGGCGTCATAAGATTCGTTTTTAA

Domains

Predicted by InterProScan.

RecR protein (RecR_ZnF)

(41-77)

Toprim domain (Toprim_4)

(81-172)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P0A7H7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recR Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539

45.226

99.005

0.448
  recR Bacillus subtilis subsp. subtilis str. 168

44.724

99.005

0.443

Multiple sequence alignment