Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | EJ379_RS10165 | Genome accession | NZ_CP034551 |
| Coordinates | 1944982..1945269 (+) | Length | 95 a.a. |
| NCBI ID | WP_000648324.1 | Uniprot ID | - |
| Organism | Bacillus cereus ATCC 14579 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1939982..1950269
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EJ379_RS10145 (EJ379_10140) | - | 1941156..1941353 (+) | 198 | WP_001048104.1 | DUF4083 domain-containing protein | - |
| EJ379_RS10150 (EJ379_10145) | - | 1941385..1941846 (+) | 462 | WP_000024999.1 | NUDIX hydrolase | - |
| EJ379_RS10155 (EJ379_10150) | nadE | 1941896..1942714 (-) | 819 | WP_000174904.1 | ammonia-dependent NAD(+) synthetase | - |
| EJ379_RS10160 (EJ379_10155) | - | 1942985..1944865 (+) | 1881 | WP_001025992.1 | ABC transporter permease | - |
| EJ379_RS10165 (EJ379_10160) | abrB | 1944982..1945269 (+) | 288 | WP_000648324.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Regulator |
| EJ379_RS10170 (EJ379_10165) | - | 1945545..1946492 (+) | 948 | WP_000099751.1 | S8 family peptidase | - |
| EJ379_RS10175 (EJ379_10170) | - | 1946534..1946842 (-) | 309 | WP_001259906.1 | helix-turn-helix transcriptional regulator | - |
| EJ379_RS10180 (EJ379_10175) | - | 1946949..1947884 (+) | 936 | WP_000877963.1 | aldo/keto reductase | - |
| EJ379_RS10185 (EJ379_10180) | - | 1947932..1949107 (+) | 1176 | WP_001082489.1 | MFS transporter | - |
| EJ379_RS28880 (EJ379_10185) | - | 1949156..1949362 (+) | 207 | WP_001101741.1 | hypothetical protein | - |
| EJ379_RS10195 (EJ379_10190) | - | 1949506..1949868 (+) | 363 | WP_001198796.1 | DUF805 domain-containing protein | - |
Sequence
Protein
Download Length: 95 a.a. Molecular weight: 10587.32 Da Isoelectric Point: 4.8408
>NTDB_id=331861 EJ379_RS10165 WP_000648324.1 1944982..1945269(+) (abrB) [Bacillus cereus ATCC 14579]
MKATGVIRKVDELGRIVIPKELRDVLGIQIKSPLEIFVEADKIILQKYQPYNACQITGDVSEQNISLANGNITVGIEGAE
YLVKEIEKFLNKSEV
MKATGVIRKVDELGRIVIPKELRDVLGIQIKSPLEIFVEADKIILQKYQPYNACQITGDVSEQNISLANGNITVGIEGAE
YLVKEIEKFLNKSEV
Nucleotide
Download Length: 288 bp
>NTDB_id=331861 EJ379_RS10165 WP_000648324.1 1944982..1945269(+) (abrB) [Bacillus cereus ATCC 14579]
ATGAAAGCAACAGGAGTTATTCGAAAAGTAGACGAATTAGGACGAATTGTTATCCCTAAAGAATTACGCGATGTATTGGG
AATACAAATCAAATCACCGCTTGAAATTTTTGTAGAAGCAGATAAAATCATTTTACAAAAATATCAACCTTACAATGCTT
GCCAAATCACAGGTGATGTTTCAGAGCAGAACATATCATTAGCAAATGGAAATATTACTGTTGGGATAGAGGGAGCGGAA
TATTTAGTAAAAGAAATAGAAAAGTTTTTAAACAAGAGTGAGGTTTAG
ATGAAAGCAACAGGAGTTATTCGAAAAGTAGACGAATTAGGACGAATTGTTATCCCTAAAGAATTACGCGATGTATTGGG
AATACAAATCAAATCACCGCTTGAAATTTTTGTAGAAGCAGATAAAATCATTTTACAAAAATATCAACCTTACAATGCTT
GCCAAATCACAGGTGATGTTTCAGAGCAGAACATATCATTAGCAAATGGAAATATTACTGTTGGGATAGAGGGAGCGGAA
TATTTAGTAAAAGAAATAGAAAAGTTTTTAAACAAGAGTGAGGTTTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
55.556 |
94.737 |
0.526 |