Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | FTO72_RS18885 | Genome accession | NZ_CP042588 |
| Coordinates | 3845843..3846283 (+) | Length | 146 a.a. |
| NCBI ID | WP_000360904.1 | Uniprot ID | P36647 |
| Organism | Escherichia coli strain PK6 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3840843..3851283
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FTO72_RS18865 (FTO72_18865) | aroP | 3841841..3843214 (+) | 1374 | WP_000969915.1 | aromatic amino acid transporter AroP | - |
| FTO72_RS18870 (FTO72_18870) | ampE | 3843257..3844111 (-) | 855 | WP_089639037.1 | beta-lactamase regulator AmpE | - |
| FTO72_RS18875 (FTO72_18875) | ampD | 3844108..3844659 (-) | 552 | WP_087894093.1 | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | - |
| FTO72_RS18880 (FTO72_18880) | nadC | 3844747..3845640 (+) | 894 | WP_001135174.1 | carboxylating nicotinate-nucleotide diphosphorylase | - |
| FTO72_RS18885 (FTO72_18885) | pilA | 3845843..3846283 (+) | 441 | WP_000360904.1 | prepilin peptidase-dependent pilin | Machinery gene |
| FTO72_RS18890 (FTO72_18890) | pilB | 3846293..3847678 (+) | 1386 | WP_001025145.1 | type II secretion system protein GspE | Machinery gene |
| FTO72_RS18895 (FTO72_18895) | hofC | 3847668..3848870 (+) | 1203 | WP_151166858.1 | protein transport protein HofC | - |
| FTO72_RS18900 (FTO72_18900) | guaC | 3848905..3849948 (-) | 1044 | WP_001217337.1 | GMP reductase | - |
| FTO72_RS23665 | - | 3850104..3850148 (-) | 45 | WP_120795372.1 | protein YacM | - |
| FTO72_RS18905 (FTO72_18905) | coaE | 3850173..3850793 (+) | 621 | WP_001269520.1 | dephospho-CoA kinase | - |
Sequence
Protein
Download Length: 146 a.a. Molecular weight: 15621.75 Da Isoelectric Point: 4.3938
>NTDB_id=331861 FTO72_RS18885 WP_000360904.1 3845843..3846283(+) (pilA) [Escherichia coli strain PK6]
MDKQRGFTLIELMVVIGIIAILSAIGIPAYQNYLRKAALTDMLQTFVPYRTAVELCALEHGGLDTCDGGSNGIPSPTTTR
YVSAMSVAKGVVSLTGQESLNGLSVVMTPGWDNANGVTGWTRNCNIQSDSALQQACEDVFRFDDAN
MDKQRGFTLIELMVVIGIIAILSAIGIPAYQNYLRKAALTDMLQTFVPYRTAVELCALEHGGLDTCDGGSNGIPSPTTTR
YVSAMSVAKGVVSLTGQESLNGLSVVMTPGWDNANGVTGWTRNCNIQSDSALQQACEDVFRFDDAN
Nucleotide
Download Length: 441 bp
>NTDB_id=331861 FTO72_RS18885 WP_000360904.1 3845843..3846283(+) (pilA) [Escherichia coli strain PK6]
ATGGACAAGCAACGCGGTTTTACACTTATCGAACTGATGGTGGTTATTGGCATCATTGCCATTTTAAGCGCCATTGGTAT
TCCCGCTTATCAAAACTACCTGCGCAAAGCCGCACTCACCGACATGCTACAAACCTTTGTGCCTTACCGTACCGCCGTAG
AGTTGTGCGCGCTGGAACATGGTGGATTAGATACCTGCGACGGTGGCAGCAATGGCATTCCCTCGCCTACCACCACCCGC
TATGTTTCAGCCATGAGTGTGGCAAAGGGCGTGGTGTCGCTGACCGGGCAAGAAAGTCTCAATGGGCTAAGCGTCGTCAT
GACACCGGGTTGGGATAACGCAAACGGCGTCACCGGCTGGACGCGCAACTGCAATATTCAAAGTGACAGCGCATTGCAGC
AAGCCTGCGAAGATGTCTTCCGCTTTGATGACGCCAACTAA
ATGGACAAGCAACGCGGTTTTACACTTATCGAACTGATGGTGGTTATTGGCATCATTGCCATTTTAAGCGCCATTGGTAT
TCCCGCTTATCAAAACTACCTGCGCAAAGCCGCACTCACCGACATGCTACAAACCTTTGTGCCTTACCGTACCGCCGTAG
AGTTGTGCGCGCTGGAACATGGTGGATTAGATACCTGCGACGGTGGCAGCAATGGCATTCCCTCGCCTACCACCACCCGC
TATGTTTCAGCCATGAGTGTGGCAAAGGGCGTGGTGTCGCTGACCGGGCAAGAAAGTCTCAATGGGCTAAGCGTCGTCAT
GACACCGGGTTGGGATAACGCAAACGGCGTCACCGGCTGGACGCGCAACTGCAATATTCAAAGTGACAGCGCATTGCAGC
AAGCCTGCGAAGATGTCTTCCGCTTTGATGACGCCAACTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Haemophilus influenzae 86-028NP |
43.089 |
84.247 |
0.363 |