Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   EHW89_RS07255 Genome accession   NZ_CP034543
Coordinates   1481636..1483402 (-) Length   588 a.a.
NCBI ID   WP_126467578.1    Uniprot ID   A0A3S9MSU4
Organism   Streptococcus periodonticum strain KCOM 2412     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1476636..1488402
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EHW89_RS07240 (EHW89_07240) manA 1477682..1478626 (-) 945 WP_126468091.1 mannose-6-phosphate isomerase, class I -
  EHW89_RS07245 (EHW89_07245) - 1478657..1479382 (-) 726 WP_126467574.1 GntR family transcriptional regulator -
  EHW89_RS07250 (EHW89_07250) rcrQ 1479886..1481646 (-) 1761 WP_126467576.1 ABC transporter ATP-binding protein Regulator
  EHW89_RS07255 (EHW89_07255) rcrP 1481636..1483402 (-) 1767 WP_126467578.1 ABC transporter ATP-binding protein Regulator
  EHW89_RS07260 (EHW89_07260) - 1483395..1483853 (-) 459 WP_003039423.1 MarR family winged helix-turn-helix transcriptional regulator -
  EHW89_RS07265 (EHW89_07265) - 1484009..1484419 (-) 411 WP_126467580.1 peptide deformylase -
  EHW89_RS07270 (EHW89_07270) scrK 1484484..1485383 (-) 900 WP_126467582.1 fructokinase ScrK -
  EHW89_RS07275 (EHW89_07275) - 1485664..1487562 (-) 1899 WP_022525147.1 sucrose-specific PTS transporter subunit IIBC -

Sequence

Protein


Download         Length: 588 a.a.        Molecular weight: 65286.01 Da        Isoelectric Point: 5.4678

>NTDB_id=331792 EHW89_RS07255 WP_126467578.1 1481636..1483402(-) (rcrP) [Streptococcus periodonticum strain KCOM 2412]
MVKLFKRLTVKEVGMIVISILFTCLTVYLELEVPTYISKITELLQMRGTVVSDLWDPGLKMIGLSFASFLSAVTVGFIAA
RLAASFTTSLRSDIFNRVLDYSDAEIKRFSIPSLLTRTTNDLTQIQLMITMGLQVVTRGPIMAIWAITKIIGKSEYWLWA
VIVAVIVNIIMTTVLMTLAFPKQSVIQRLTDKLNSITRESLTGIRVVRAYNAEDYQDDKFAGANDEVTRLNLFVSRLMAI
LNPIMMGISSGLTLAIYWIGAYLIQDAALPERLPIFSDMVVFMSYAMQVVIGFMLMGALFIILPRTLVSAGRINEVLDLY
STIESPTEPKIAKDVKGEVVFDNVSFRYAKNSEAVIEHVSFTAKAGETVAFIGSTGSGKSTLISLIPRFYDVTEGKILVD
GVNVKDYQLEDLHNKVGYIPQKAVLFSGDIKSNLDFGQSNESPLDDEKMWAALDLAQAKSFVEEKEDGLQSEVAQSGTNF
SGGQKQRLAIARALARKPEILIFDDSFSALDYKTDRILREELAKKVKDTTRLIVAQRISTIMDADQILVLDKGKVVGQGT
HKELLATNAVYQEIAYSQLSKEELENGK

Nucleotide


Download         Length: 1767 bp        

>NTDB_id=331792 EHW89_RS07255 WP_126467578.1 1481636..1483402(-) (rcrP) [Streptococcus periodonticum strain KCOM 2412]
ATGGTTAAATTGTTTAAACGTTTAACTGTCAAAGAAGTAGGGATGATTGTCATCAGTATCTTGTTTACTTGTTTAACAGT
TTATTTGGAATTAGAGGTTCCAACTTATATTTCAAAAATTACGGAACTCCTACAGATGAGGGGGACAGTAGTTTCTGATT
TGTGGGATCCAGGTTTGAAAATGATTGGGCTGTCTTTTGCGAGCTTTCTTAGTGCTGTGACAGTTGGCTTTATTGCGGCT
AGATTGGCGGCTAGCTTTACAACGAGTTTGCGGTCAGATATTTTCAATCGTGTACTGGATTATTCAGACGCTGAGATTAA
GCGATTCTCTATTCCGAGTCTTTTGACGCGGACAACCAACGATCTTACGCAAATTCAGCTCATGATTACCATGGGCTTGC
AAGTTGTGACGCGTGGGCCAATCATGGCGATTTGGGCGATTACGAAAATCATTGGGAAATCAGAATACTGGCTCTGGGCG
GTTATTGTGGCGGTTATTGTGAATATTATCATGACAACAGTTCTGATGACGTTGGCCTTTCCAAAGCAATCTGTTATTCA
ACGGTTGACTGATAAGTTAAATAGTATTACGCGTGAAAGTCTAACAGGGATTCGTGTTGTTCGGGCTTATAACGCTGAAG
ACTATCAAGATGACAAGTTTGCAGGAGCTAATGATGAAGTGACTCGTTTGAATCTCTTTGTCAGTCGTCTCATGGCGATT
TTAAATCCAATTATGATGGGGATTTCGAGCGGCTTGACTTTGGCGATTTATTGGATTGGGGCTTACTTGATTCAAGACGC
AGCCTTACCAGAACGTTTGCCAATTTTTAGTGATATGGTCGTCTTTATGTCTTATGCCATGCAAGTGGTGATAGGCTTCA
TGCTTATGGGGGCTCTTTTTATCATTCTACCTCGTACCTTGGTGTCTGCCGGACGGATCAATGAAGTGCTTGATTTATAT
TCAACGATTGAGTCTCCAACAGAGCCAAAAATAGCGAAAGATGTCAAAGGTGAAGTGGTATTTGACAATGTATCTTTCCG
CTATGCTAAAAATTCTGAGGCTGTTATCGAACATGTTAGCTTTACAGCTAAAGCAGGTGAAACCGTAGCTTTCATTGGAT
CAACTGGTTCTGGGAAATCCACTTTAATCAGCTTAATTCCTCGTTTCTATGATGTGACAGAAGGAAAAATTTTAGTGGAT
GGCGTAAACGTCAAAGATTATCAGCTGGAAGATTTGCATAATAAAGTTGGCTACATTCCACAAAAAGCTGTCCTCTTCTC
TGGTGATATCAAGAGTAATTTAGACTTTGGGCAAAGCAATGAAAGCCCATTGGATGACGAAAAAATGTGGGCTGCACTTG
ATTTGGCACAGGCTAAATCATTTGTTGAAGAAAAAGAAGACGGTTTGCAATCTGAAGTTGCACAAAGCGGTACGAATTTC
TCTGGTGGGCAAAAGCAACGTTTGGCAATTGCGCGTGCGCTTGCTCGCAAGCCTGAAATTTTGATTTTTGATGATTCATT
TTCAGCGCTGGACTATAAGACAGACCGCATTTTGCGGGAAGAATTAGCGAAAAAAGTGAAGGACACAACGAGATTGATTG
TGGCGCAGCGGATTTCAACCATTATGGACGCCGATCAGATTTTGGTATTGGATAAAGGGAAAGTAGTCGGTCAGGGTACT
CATAAAGAATTGCTGGCAACGAACGCAGTTTATCAAGAAATTGCTTACTCACAATTATCGAAGGAGGAATTGGAAAATGG
AAAATAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(357-506)

ABC transporter transmembrane region (ABC_membrane)

(17-289)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A3S9MSU4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

70.5

100

0.719

Multiple sequence alignment