Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   EHW89_RS07250 Genome accession   NZ_CP034543
Coordinates   1479886..1481646 (-) Length   586 a.a.
NCBI ID   WP_126467576.1    Uniprot ID   A0A3S9MST8
Organism   Streptococcus periodonticum strain KCOM 2412     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1474886..1486646
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EHW89_RS07235 (EHW89_07235) - 1475581..1477428 (-) 1848 WP_126467572.1 APC family permease -
  EHW89_RS07240 (EHW89_07240) manA 1477682..1478626 (-) 945 WP_126468091.1 mannose-6-phosphate isomerase, class I -
  EHW89_RS07245 (EHW89_07245) - 1478657..1479382 (-) 726 WP_126467574.1 GntR family transcriptional regulator -
  EHW89_RS07250 (EHW89_07250) rcrQ 1479886..1481646 (-) 1761 WP_126467576.1 ABC transporter ATP-binding protein Regulator
  EHW89_RS07255 (EHW89_07255) rcrP 1481636..1483402 (-) 1767 WP_126467578.1 ABC transporter ATP-binding protein Regulator
  EHW89_RS07260 (EHW89_07260) - 1483395..1483853 (-) 459 WP_003039423.1 MarR family winged helix-turn-helix transcriptional regulator -
  EHW89_RS07265 (EHW89_07265) - 1484009..1484419 (-) 411 WP_126467580.1 peptide deformylase -
  EHW89_RS07270 (EHW89_07270) scrK 1484484..1485383 (-) 900 WP_126467582.1 fructokinase ScrK -

Sequence

Protein


Download         Length: 586 a.a.        Molecular weight: 65036.04 Da        Isoelectric Point: 6.0264

>NTDB_id=331791 EHW89_RS07250 WP_126467576.1 1479886..1481646(-) (rcrQ) [Streptococcus periodonticum strain KCOM 2412]
MENKKSSLFSQVKPYLKGFQLPLLIAFVGAAVSSIITVYGPDKLKEITNLITEGMRSQIDLKSISNIALFLAILYAAGAL
LNYVQSFIISSVIQHFSKRLRTAIAEKINKLPLRYFDSHSQGDTLSRVTNDVDTVGQSLNQSLGTVISSSLLLIAVLFMM
FYNNVVLSFVTISSVLIGFVFVALIMGKSQRFFRAQQENLASVNGYVEEMYSGHNVIVSYNATDESKVAFQTLNTNLYNS
MWKSQFISGIMMPLMMFVGNFGYVMVVLVGASMALNGDVTMGTIVAFMVYVRIFSQPLSQIAQGITTLQQASAAMGRVFE
FLAEPEMENDEHKAQQLTTLKGDVTFDKVFFSYNPDRTIIHDFSANAKAGQKIAIVGPTGAGKTTIVNLLMKFYEIDKGR
ITIDGVDTKQMKRSEVHDAFSMVLQDTWLFEGTIKENLIYNQKNISDEAVVAAAKAVGVHHFIKTLPKGYDTVLDDTVSL
SVGQKQLLTIARALLKDAPLLILDEATSSVDTRTEELIQKAMDKLMEGRTSFVIAHRLSTIRNADLILVMRDGNIIEQGN
HEQLMEQNGFYADLYNSQFDEDAEYA

Nucleotide


Download         Length: 1761 bp        

>NTDB_id=331791 EHW89_RS07250 WP_126467576.1 1479886..1481646(-) (rcrQ) [Streptococcus periodonticum strain KCOM 2412]
ATGGAAAATAAAAAATCGTCTTTATTTAGCCAAGTGAAACCTTATCTCAAAGGTTTTCAGCTTCCATTGCTCATTGCATT
TGTGGGAGCGGCAGTGTCTAGTATTATTACAGTTTATGGACCAGACAAATTAAAAGAAATTACCAACCTTATCACAGAGG
GGATGCGAAGTCAGATTGATTTGAAATCAATCTCCAACATTGCTCTTTTCTTAGCGATTTTGTACGCAGCAGGTGCTTTG
TTAAATTACGTTCAATCTTTTATCATTTCATCTGTTATTCAGCATTTCTCCAAGCGCTTGCGGACTGCTATTGCTGAAAA
AATCAATAAATTGCCTCTACGCTATTTTGACAGCCATTCCCAAGGGGATACTCTTTCACGGGTCACAAATGACGTGGATA
CTGTTGGACAATCTTTGAACCAAAGTTTAGGAACGGTGATTTCATCAAGTTTGCTGCTTATTGCGGTTCTCTTTATGATG
TTTTACAATAATGTGGTCTTGTCCTTTGTAACGATTAGCTCAGTCTTGATTGGCTTTGTCTTTGTTGCTTTGATTATGGG
AAAATCTCAACGATTCTTCCGAGCACAACAAGAAAATCTTGCCAGCGTCAATGGCTATGTGGAAGAAATGTACTCTGGGC
ATAATGTCATTGTCAGCTACAATGCCACAGACGAATCCAAAGTAGCCTTTCAAACACTTAATACTAACCTTTACAACAGT
ATGTGGAAATCACAATTCATTTCAGGGATTATGATGCCGCTTATGATGTTTGTAGGGAACTTCGGTTACGTTATGGTTGT
TTTGGTTGGGGCGAGCATGGCCTTGAATGGCGATGTCACTATGGGAACGATTGTTGCCTTTATGGTATATGTACGGATTT
TCTCTCAACCGTTGTCACAAATTGCACAAGGGATTACTACTCTTCAACAAGCTAGCGCTGCTATGGGACGCGTATTTGAA
TTTTTAGCAGAGCCTGAAATGGAAAATGATGAGCATAAAGCGCAACAACTCACGACCCTAAAAGGAGATGTTACCTTTGA
TAAGGTATTCTTTAGTTATAATCCAGATCGAACGATTATTCATGATTTCTCTGCCAATGCAAAAGCAGGGCAAAAAATTG
CCATTGTCGGTCCGACCGGTGCTGGGAAGACGACCATTGTCAACTTGCTCATGAAATTTTATGAGATTGATAAGGGTCGC
ATTACAATTGACGGTGTTGATACAAAGCAAATGAAACGTTCTGAGGTACACGATGCCTTCTCCATGGTTCTTCAAGACAC
TTGGTTATTTGAGGGAACGATTAAAGAAAATTTGATTTACAATCAGAAAAATATTTCTGACGAAGCAGTTGTGGCAGCTG
CCAAAGCTGTTGGGGTTCATCACTTCATCAAGACTTTGCCAAAAGGATACGATACGGTGCTGGACGATACAGTAAGCCTT
TCTGTTGGGCAAAAGCAATTGCTGACCATTGCGCGTGCCCTTCTTAAAGATGCTCCATTACTTATCTTGGACGAAGCGAC
TTCATCTGTTGATACACGGACGGAAGAGCTGATTCAAAAAGCGATGGATAAACTAATGGAAGGACGGACTTCCTTTGTCA
TTGCTCACCGTTTGTCAACGATTCGTAATGCTGACTTAATTTTGGTTATGCGAGATGGCAATATCATTGAACAAGGCAAT
CATGAACAATTGATGGAACAAAACGGCTTCTATGCTGATCTTTACAATAGTCAATTCGATGAAGACGCAGAGTATGCGTA
A

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(361-508)

ABC transporter transmembrane region (ABC_membrane)

(23-298)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A3S9MST8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

72.165

99.317

0.717

Multiple sequence alignment