Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   FGL73_RS09330 Genome accession   NZ_CP042408
Coordinates   1933321..1934106 (-) Length   261 a.a.
NCBI ID   WP_098393052.1    Uniprot ID   -
Organism   Lactococcus lactis strain CBA3619     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1928321..1939106
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGL73_RS09305 (FGL73_09305) - 1928923..1930092 (+) 1170 WP_015425630.1 ring-cleaving dioxygenase -
  FGL73_RS09310 (FGL73_09310) - 1930103..1930693 (+) 591 WP_038598419.1 flavin reductase family protein -
  FGL73_RS09315 (FGL73_09315) rpmG 1930772..1930921 (-) 150 WP_003132258.1 50S ribosomal protein L33 -
  FGL73_RS09320 (FGL73_09320) rpmF 1930951..1931124 (-) 174 WP_010905107.1 50S ribosomal protein L32 -
  FGL73_RS09325 (FGL73_09325) - 1931488..1933269 (+) 1782 WP_098393051.1 heavy metal translocating P-type ATPase -
  FGL73_RS09330 (FGL73_09330) spo0J 1933321..1934106 (-) 786 WP_098393052.1 ParB/RepB/Spo0J family partition protein Regulator
  FGL73_RS09335 (FGL73_09335) rarA 1934161..1935420 (-) 1260 WP_038598427.1 replication-associated recombination protein A Machinery gene
  FGL73_RS09340 (FGL73_09340) - 1935464..1935952 (-) 489 WP_038598431.1 GNAT family N-acetyltransferase -
  FGL73_RS09345 (FGL73_09345) - 1936104..1936571 (+) 468 WP_029344682.1 DUF3013 family protein -
  FGL73_RS09350 (FGL73_09350) - 1936601..1938154 (+) 1554 WP_038598438.1 ABC-F family ATP-binding cassette domain-containing protein -
  FGL73_RS09355 (FGL73_09355) - 1938263..1938547 (+) 285 WP_010905114.1 hypothetical protein -
  FGL73_RS09360 (FGL73_09360) - 1938585..1939073 (+) 489 WP_146978315.1 YdeI/OmpD-associated family protein -

Sequence

Protein


Download         Length: 261 a.a.        Molecular weight: 29714.53 Da        Isoelectric Point: 9.3858

>NTDB_id=331624 FGL73_RS09330 WP_098393052.1 1933321..1934106(-) (spo0J) [Lactococcus lactis strain CBA3619]
MVEQITQLKLSTIVKNPYQPRLVFDEDKLKELANSIQENGVLQPIIVRKSKLVGYELLAGERRFQASKLAGLETIPAIIR
SYSDEEMMTLSILENLQRENLNPLEESKSLAQLADKLGMTHDQIAKALGKSRSYVSNLIRLLGLPDTILKHVENREISPA
HARTLLAEKNPKKQLDLVDKIIKEQLNVRALEAIIYGEEKVTDKSVSNLNINLFTDETEKELMKKLGNRVKIQATKKYQG
NLSIHFDNLDELEHLIKLLKK

Nucleotide


Download         Length: 786 bp        

>NTDB_id=331624 FGL73_RS09330 WP_098393052.1 1933321..1934106(-) (spo0J) [Lactococcus lactis strain CBA3619]
ATGGTAGAACAAATCACTCAACTTAAGTTGTCAACAATTGTAAAAAACCCTTACCAGCCTCGTCTTGTTTTTGATGAGGA
TAAATTAAAAGAATTGGCTAATTCTATCCAAGAAAATGGCGTTTTACAACCCATAATCGTTCGTAAATCAAAACTTGTTG
GCTATGAGCTTTTAGCAGGTGAACGTCGGTTTCAAGCTTCAAAATTAGCTGGTTTAGAAACTATACCAGCAATTATTAGA
AGCTATTCTGATGAAGAAATGATGACTCTCTCAATTTTAGAAAATTTGCAGAGAGAAAATCTCAATCCACTAGAAGAGTC
CAAAAGCTTGGCACAACTTGCTGACAAATTGGGAATGACCCACGATCAAATCGCTAAGGCCCTTGGAAAATCAAGGTCTT
ATGTCTCTAATCTTATTCGTTTACTTGGTTTGCCTGACACAATTTTGAAGCATGTTGAAAATCGAGAGATTTCACCTGCT
CACGCTAGAACACTTTTAGCTGAAAAAAATCCTAAAAAGCAATTAGACCTCGTTGATAAAATAATTAAAGAGCAGCTCAA
TGTCAGAGCACTTGAAGCTATTATTTATGGTGAAGAAAAAGTTACTGACAAATCTGTCAGTAACTTAAATATCAATCTTT
TTACTGACGAAACTGAAAAAGAACTGATGAAAAAATTGGGAAATAGGGTTAAGATTCAAGCAACTAAAAAATATCAAGGG
AATTTATCCATTCATTTTGATAATCTTGATGAACTAGAACATCTAATAAAATTACTAAAAAAATAA

Domains

Predicted by InterProScan.

ParB/Sulfiredoxin domain (ParB_N)

(7-95)

HTH domain found in ParB protein (HTH_ParB)

(147-195)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

46.875

98.084

0.46

Multiple sequence alignment