Detailed information    

insolico Bioinformatically predicted

Overview

Name   recN   Type   Machinery gene
Locus tag   FGL89_RS07210 Genome accession   NZ_CP042374
Coordinates   1444407..1446086 (+) Length   559 a.a.
NCBI ID   WP_014974643.1    Uniprot ID   K0DB03
Organism   Leuconostoc carnosum strain CBA3620     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1439407..1451086
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGL89_RS07180 (FGL89_07180) - 1439480..1440622 (+) 1143 WP_014974649.1 CamS family sex pheromone protein -
  FGL89_RS07185 (FGL89_07185) xseA 1440677..1441963 (+) 1287 WP_014974648.1 exodeoxyribonuclease VII large subunit -
  FGL89_RS07190 (FGL89_07190) - 1441956..1442180 (+) 225 WP_014974647.1 exodeoxyribonuclease VII small subunit -
  FGL89_RS07195 (FGL89_07195) - 1442173..1443081 (+) 909 WP_014974646.1 polyprenyl synthetase family protein -
  FGL89_RS07200 (FGL89_07200) - 1443078..1443920 (+) 843 WP_014974645.1 TlyA family RNA methyltransferase -
  FGL89_RS07205 (FGL89_07205) - 1443913..1444368 (+) 456 WP_014974644.1 arginine repressor -
  FGL89_RS07210 (FGL89_07210) recN 1444407..1446086 (+) 1680 WP_014974643.1 DNA repair protein RecN Machinery gene
  FGL89_RS07215 (FGL89_07215) - 1446149..1447456 (-) 1308 WP_014974642.1 NCS2 family permease -
  FGL89_RS07220 (FGL89_07220) - 1447611..1448966 (-) 1356 WP_014974641.1 MATE family efflux transporter -
  FGL89_RS07225 (FGL89_07225) - 1449104..1449769 (+) 666 WP_014974640.1 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase -
  FGL89_RS07230 (FGL89_07230) pepA 1449807..1450883 (+) 1077 WP_014974639.1 glutamyl aminopeptidase -

Sequence

Protein


Download         Length: 559 a.a.        Molecular weight: 62362.47 Da        Isoelectric Point: 4.6734

>NTDB_id=331547 FGL89_RS07210 WP_014974643.1 1444407..1446086(+) (recN) [Leuconostoc carnosum strain CBA3620]
MLENLIIENFAIIEKVNLEFDGGMSVLTGETGAGKSIIIDALSMLTGGRANSEMVRHGSHKAVLQAVFSVPNNTNLLNDL
DHNGITIEDGELIIYRELNQNGRSTIRINSVLVNLKTLSVIGQHLVDIQGQNDTQQLLNSEEHLPLLDAFGGENLAIVKR
QYAKLFNDFRSITQHIRKIQTSQQEITQRLDLLQFQQQELNDAALEAHEEEHLLDSRGKLINFKKIADRLQSAQTALNGD
QVGAVDLLAEAMHVLQEISEYDDNYAELATTIADSYYVAQEVGRDVDEQMGQLTYDETELLRIEERLQLIHSLERKYGTT
VADVLAFQSKVDQELSAIDHDEYDIEQLQIKKNELRQVLRKQAIKLREVRQQVARDLEQNVNQQLSDLLMPGAEFEVHFE
PIEGFVSSGTDKIEFYVQTNIGEGMAPLVKIASGGEAARLMLALKTTFAKQQHIISIIFDEADTGVSGRVAQAIAKKMMT
IATDSQVLAITHLPQVAAAATHHFLISKATENDRTITKVQHLDENGRERAIAMMLSGDKITDTALANARDLRLQATDIN

Nucleotide


Download         Length: 1680 bp        

>NTDB_id=331547 FGL89_RS07210 WP_014974643.1 1444407..1446086(+) (recN) [Leuconostoc carnosum strain CBA3620]
ATGTTAGAAAATCTTATTATTGAAAATTTTGCGATTATTGAAAAGGTGAATTTAGAATTTGACGGTGGAATGAGCGTCTT
AACTGGTGAAACAGGTGCAGGAAAATCAATTATCATTGATGCTTTGTCGATGCTAACTGGTGGCCGTGCGAATTCTGAGA
TGGTGCGCCACGGTAGTCATAAGGCAGTTTTACAAGCGGTTTTTAGTGTACCCAATAATACAAATTTGCTCAATGATCTT
GATCATAATGGTATTACTATCGAAGATGGTGAGTTAATCATTTATCGTGAATTAAACCAAAATGGACGTAGTACTATTCG
AATAAATAGTGTTTTAGTTAATTTGAAAACATTATCTGTTATTGGGCAACATTTGGTGGATATTCAAGGACAAAATGATA
CACAACAGCTATTAAATAGTGAAGAACATTTGCCCTTGCTGGACGCATTTGGTGGTGAAAATCTTGCAATCGTTAAGCGG
CAATACGCCAAGTTATTTAATGATTTCCGTTCAATCACGCAACACATTAGAAAAATTCAAACATCACAGCAAGAAATAAC
GCAACGACTAGATCTATTGCAATTTCAGCAACAAGAACTAAATGATGCCGCATTAGAAGCGCATGAAGAAGAACACTTAC
TAGATTCACGCGGTAAACTGATCAATTTCAAAAAAATTGCTGATCGTTTGCAGAGTGCGCAAACTGCGCTTAATGGCGAT
CAAGTTGGGGCTGTTGATTTGTTAGCAGAAGCGATGCATGTGTTGCAAGAAATTTCAGAATACGATGATAATTATGCCGA
ATTAGCAACCACAATTGCAGATAGTTATTACGTTGCTCAAGAAGTTGGACGTGATGTTGATGAGCAGATGGGTCAACTAA
CATATGATGAAACAGAGTTATTGCGTATTGAAGAACGGTTACAGTTGATTCATTCTTTGGAAAGAAAATATGGAACAACG
GTCGCTGATGTTCTAGCTTTCCAATCAAAAGTTGATCAGGAATTATCAGCTATTGATCACGATGAATACGATATAGAACA
ACTTCAGATAAAGAAAAATGAATTGAGACAAGTTTTACGTAAACAGGCTATTAAATTACGAGAAGTCAGGCAACAAGTTG
CCCGAGATTTAGAACAAAATGTGAACCAACAATTGAGTGACTTGTTGATGCCTGGTGCTGAATTTGAAGTACATTTTGAA
CCAATTGAAGGTTTTGTGTCATCAGGAACAGATAAAATTGAATTTTACGTTCAAACAAATATTGGTGAAGGTATGGCGCC
GTTAGTTAAAATTGCATCTGGTGGTGAAGCTGCGCGATTAATGTTAGCGTTAAAAACAACATTTGCTAAGCAACAACATA
TTATTTCAATTATTTTTGATGAGGCAGACACAGGTGTATCAGGTCGTGTTGCTCAGGCAATTGCAAAAAAAATGATGACA
ATTGCTACTGATTCACAAGTATTAGCGATTACTCATCTACCACAGGTTGCCGCGGCCGCCACACACCATTTTTTAATTTC
AAAAGCAACTGAAAATGATCGTACCATCACTAAAGTACAGCATCTTGATGAAAATGGACGGGAACGTGCGATTGCAATGA
TGTTATCAGGAGATAAAATTACTGATACTGCACTTGCCAATGCCAGAGATTTACGTCTTCAGGCAACTGATATAAATTAA

Domains

Predicted by InterProScan.

AAA domain (AAA_23)

(5-226)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB K0DB03

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recN Bacillus subtilis subsp. subtilis str. 168

37.391

100

0.385