Detailed information NTG0331507

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: FGL89_RS02530
• Genome accession: NZ_CP042374
• Coordinates: 533156..534400 (-)
• Length: 414 a.a.
• NCBI ID: WP_147000329.1
• Uniprot ID: -
• Organism: Leuconostoc carnosum strain CBA3620
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 528156..539400

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FGL89_RS02500 (FGL89_02500)	-	528313..528627 (-)	315	WP_014973973.1	PTS cellobiose transporter subunit IIB	-
FGL89_RS02505 (FGL89_02505)	-	528641..530077 (-)	1437	WP_014973972.1	6-phospho-beta-glucosidase	-
FGL89_RS02510 (FGL89_02510)	-	530231..531034 (-)	804	WP_014973971.1	Cof-type HAD-IIB family hydrolase	-
FGL89_RS02515 (FGL89_02515)	-	531100..531279 (-)	180	WP_014973970.1	BC10 family protein	-
FGL89_RS02520 (FGL89_02520)	ffh	531279..532754 (-)	1476	WP_041773187.1	signal recognition particle protein	-
FGL89_RS02525 (FGL89_02525)	ylxM	532815..533159 (-)	345	WP_014973968.1	YlxM family DNA-binding protein	-
FGL89_RS02530 (FGL89_02530)	pilA	533156..534400 (-)	1245	WP_147000329.1	signal recognition particle-docking protein FtsY	Machinery gene
FGL89_RS02535 (FGL89_02535)	smc	534403..537957 (-)	3555	WP_147000331.1	chromosome segregation protein SMC	-
FGL89_RS02540 (FGL89_02540)	rnc	537961..538662 (-)	702	WP_014973965.1	ribonuclease III	-

Sequence

Protein

• Length: 414 a.a.
• Molecular weight: 46110.15 Da
• Isoelectric Point: 4.2159

>NTDB_id=331507 FGL89_RS02530 WP_147000329.1 533156..534400(-) (pilA) [Leuconostoc carnosum strain CBA3620]
MGLFDIFRKKKTVVDSEATETSVESEATTESTTSELETSETQPTHDSEIAVETLDSQAESTSQSTETETETETETETETE
TETETETETETETETETETETETETEQQVYNKGLEKSRTGFAARLNKFLANFRSVDEDFFEDLEETLVGADVGFDMAIKI
SDELREEVKLQHAKRKEDVRDVIIKKVVDMYEADGINEDATMHFNTNGTTVILLVGVNGVGKTTTIGKLSTKYQQQGKSV
LLAAADTFRAGATKQLQEWGDRAHVPVVVGKEKADPASVVFEAVAKARDEHYDVLFVDTAGRLQNNVNLMQELEKMKRII
QREIPDAPHEVLLVLDATTGQNALQQAKLFKDSSDVTGIVLTKMDGTAKGGIVFAIRNEMHLPVKWIGFGEKASDLREFM
PEEFVYGLFKDLVE

Nucleotide

• Length: 1245 bp

>NTDB_id=331507 FGL89_RS02530 WP_147000329.1 533156..534400(-) (pilA) [Leuconostoc carnosum strain CBA3620]
ATGGGATTATTTGATATTTTTCGCAAAAAGAAAACTGTGGTCGATAGTGAAGCAACTGAAACTTCTGTTGAATCAGAAGC
CACCACTGAGTCAACGACTTCAGAATTAGAAACATCGGAAACGCAACCGACTCATGATTCAGAAATTGCGGTAGAAACAC
TTGACAGTCAAGCTGAGAGTACGTCACAATCAACAGAAACAGAAACAGAAACAGAAACAGAAACAGAAACAGAAACAGAA
ACAGAAACAGAAACAGAAACAGAAACAGAAACAGAAACAGAAACAGAAACAGAAACAGAAACAGAAACAGAAACAGAACA
GCAAGTTTATAATAAAGGGTTAGAAAAATCTCGTACAGGTTTTGCAGCACGATTAAATAAATTTTTAGCTAATTTTCGTT
CTGTTGATGAAGACTTCTTTGAAGATCTAGAAGAAACATTAGTCGGTGCCGATGTTGGTTTTGATATGGCGATTAAAATT
TCTGATGAGTTGCGCGAGGAAGTTAAACTACAACATGCCAAACGTAAAGAAGATGTCCGTGATGTAATCATCAAAAAAGT
TGTTGATATGTATGAAGCAGATGGTATTAATGAAGATGCCACAATGCATTTTAATACCAACGGGACCACGGTTATTTTAT
TGGTAGGTGTCAATGGTGTTGGTAAGACGACCACTATTGGTAAGTTATCGACAAAATATCAGCAACAAGGGAAGTCTGTT
TTGCTAGCTGCGGCCGATACATTCCGTGCTGGCGCCACAAAACAATTACAAGAATGGGGTGATCGGGCACATGTGCCGGT
CGTTGTTGGTAAAGAGAAAGCTGATCCGGCTTCAGTTGTGTTCGAAGCTGTTGCTAAAGCGCGTGATGAACATTATGATG
TTTTGTTTGTGGATACCGCAGGACGTTTGCAAAACAATGTGAACTTAATGCAGGAATTAGAAAAAATGAAACGTATCATT
CAGCGTGAAATTCCAGATGCACCACACGAAGTTCTGCTTGTACTAGATGCGACAACAGGACAGAATGCTTTACAACAAGC
CAAGTTATTTAAAGATTCATCTGATGTTACTGGCATTGTCTTAACCAAAATGGATGGTACAGCGAAGGGCGGTATTGTAT
TTGCTATTCGTAATGAGATGCATTTACCTGTTAAATGGATTGGTTTTGGTGAAAAGGCAAGTGACTTACGTGAATTTATG
CCGGAAGAATTTGTTTATGGCTTATTTAAGGACTTAGTTGAATGA

Domains

Predicted by InterProScan.

• SRP54-type protein, GTPase domain (SRP54) (210-409)

• SRP54-type protein, helical bundle domain (SRP54_N) (123-184)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	37.089	100	0.382