Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   FGL89_RS01255 Genome accession   NZ_CP042374
Coordinates   267885..268526 (+) Length   213 a.a.
NCBI ID   WP_014974221.1    Uniprot ID   K0D6S7
Organism   Leuconostoc carnosum strain CBA3620     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 262885..273526
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGL89_RS01225 (FGL89_01225) tsf 263662..264537 (-) 876 WP_147000269.1 translation elongation factor Ts -
  FGL89_RS01230 (FGL89_01230) rpsB 264651..265427 (-) 777 WP_014974226.1 30S ribosomal protein S2 -
  FGL89_RS01235 (FGL89_01235) - 265587..265871 (-) 285 WP_147000270.1 GIY-YIG nuclease family protein -
  FGL89_RS01240 (FGL89_01240) - 265868..266632 (-) 765 WP_014974224.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  FGL89_RS01245 (FGL89_01245) - 266695..267342 (+) 648 WP_014974223.1 lysophospholipid acyltransferase family protein -
  FGL89_RS01250 (FGL89_01250) - 267353..267586 (-) 234 WP_172600968.1 YneF family protein -
  FGL89_RS01255 (FGL89_01255) dinR/lexA 267885..268526 (+) 642 WP_014974221.1 transcriptional repressor LexA Regulator
  FGL89_RS01260 (FGL89_01260) pyrE 268575..269210 (-) 636 WP_147000271.1 orotate phosphoribosyltransferase -
  FGL89_RS01265 (FGL89_01265) pyrF 269211..269903 (-) 693 WP_147000272.1 orotidine-5'-phosphate decarboxylase -
  FGL89_RS01270 (FGL89_01270) carB 269994..273173 (-) 3180 WP_147000273.1 carbamoyl-phosphate synthase large subunit -

Sequence

Protein


Download         Length: 213 a.a.        Molecular weight: 23272.62 Da        Isoelectric Point: 4.8179

>NTDB_id=331498 FGL89_RS01255 WP_014974221.1 267885..268526(+) (dinR/lexA) [Leuconostoc carnosum strain CBA3620]
MANNIKESKQLQVLRFIHEAQLSNGYPPTVREVGEAVGLSSSSTIHGHIERLVKKGYLLKDAAKPRARAIEVSDAGLEAL
GLSTTPGRIPVLGLVTAGTPVLAVEEEATEFFPIPDNLMQFDGDMFMLNVKGNSMVNIGILDGDKVIVRKQDNADNGDVV
VAMNEDDEATVKRFFREADHFRLQPENDAMAPIILNNVSILGKVIGLYRDAIY

Nucleotide


Download         Length: 642 bp        

>NTDB_id=331498 FGL89_RS01255 WP_014974221.1 267885..268526(+) (dinR/lexA) [Leuconostoc carnosum strain CBA3620]
ATGGCAAACAATATTAAAGAAAGTAAACAACTACAAGTATTGCGCTTCATCCATGAAGCACAATTATCAAATGGTTATCC
ACCAACAGTGCGTGAAGTTGGTGAAGCAGTTGGTTTATCCTCATCATCTACAATTCATGGGCACATCGAACGTTTGGTTA
AAAAGGGCTACTTACTCAAGGATGCTGCAAAACCACGTGCACGTGCAATTGAAGTAAGTGATGCCGGATTGGAAGCACTA
GGATTATCAACAACTCCTGGTCGTATTCCTGTTCTTGGGCTTGTTACAGCAGGTACACCTGTTTTAGCAGTTGAAGAAGA
AGCGACGGAGTTCTTCCCAATTCCCGATAATTTAATGCAATTTGATGGCGACATGTTCATGTTAAATGTTAAGGGAAACT
CGATGGTCAATATCGGGATTCTAGATGGTGACAAGGTAATTGTTCGTAAGCAAGACAATGCCGACAACGGCGATGTTGTC
GTTGCTATGAATGAAGATGACGAAGCCACTGTCAAACGCTTTTTCAGAGAAGCAGATCATTTCCGTTTACAACCAGAAAA
TGACGCCATGGCACCTATTATTTTAAACAATGTCTCAATTCTTGGTAAGGTCATTGGCCTTTACCGTGACGCTATTTATT
AA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(9-67)

Peptidase S24-like (Peptidase_S24)

(90-205)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB K0D6S7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

55.721

94.366

0.526

Multiple sequence alignment