Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   EJN92_RS14665 Genome accession   NZ_CP034464
Coordinates   3354498..3354893 (+) Length   131 a.a.
NCBI ID   WP_194074993.1    Uniprot ID   -
Organism   Undibacterium parvum strain DSM 23061     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3349498..3359893
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EJN92_RS14645 (EJN92_14645) - 3349762..3351600 (-) 1839 WP_126128503.1 TolC family outer membrane protein -
  EJN92_RS14650 (EJN92_14650) hemL 3351779..3353065 (-) 1287 WP_126128504.1 glutamate-1-semialdehyde 2,1-aminomutase -
  EJN92_RS14655 (EJN92_14655) - 3353110..3353949 (-) 840 WP_126128505.1 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase -
  EJN92_RS14660 (EJN92_14660) - 3354132..3354302 (+) 171 WP_126129946.1 rubredoxin -
  EJN92_RS14665 (EJN92_14665) pilG 3354498..3354893 (+) 396 WP_194074993.1 response regulator Regulator
  EJN92_RS14670 (EJN92_14670) - 3354910..3355275 (+) 366 WP_126128507.1 response regulator transcription factor -
  EJN92_RS14675 (EJN92_14675) - 3355297..3355896 (+) 600 WP_126128508.1 chemotaxis protein CheW -
  EJN92_RS14680 (EJN92_14680) - 3355945..3358278 (+) 2334 WP_126128509.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 131 a.a.        Molecular weight: 14583.90 Da        Isoelectric Point: 8.4693

>NTDB_id=331496 EJN92_RS14665 WP_194074993.1 3354498..3354893(+) (pilG) [Undibacterium parvum strain DSM 23061]
MLTGNENLKIMVIDDSSTIRRSAEIFLGQVGYKVILAEDGFDALAKINDTHPDLIFCDILMPRLDGYQTCALIKKSAKFR
NTPVIMLSSKDGLFDRARGAMVGSDEYLTKPFTKDSLLKTVRNYTSVQASK

Nucleotide


Download         Length: 396 bp        

>NTDB_id=331496 EJN92_RS14665 WP_194074993.1 3354498..3354893(+) (pilG) [Undibacterium parvum strain DSM 23061]
ATGTTGACAGGTAATGAAAACTTAAAAATCATGGTGATCGATGATAGTAGTACTATCCGTCGATCGGCTGAAATATTTTT
AGGGCAAGTGGGGTATAAAGTAATTTTAGCCGAAGACGGTTTTGACGCTTTGGCAAAAATTAATGACACTCATCCAGACC
TGATTTTTTGCGACATACTCATGCCTAGACTGGATGGTTATCAAACCTGCGCACTAATTAAGAAAAGTGCGAAATTTCGC
AATACACCGGTAATCATGCTGTCATCCAAAGATGGTTTGTTCGATCGGGCGCGTGGGGCAATGGTGGGGTCGGATGAATA
TTTGACTAAACCGTTTACGAAAGACAGTTTGCTTAAAACGGTTCGTAATTACACCTCAGTGCAAGCATCAAAATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

66.942

92.366

0.618

Multiple sequence alignment