Detailed information
Bioinformatically predicted
Overview
| Name | clpE | Type | Regulator |
| Locus tag | EJF26_RS08855 | Genome accession | NZ_CP034442 |
| Coordinates | 1728405..1730501 (+) | Length | 698 a.a. |
| NCBI ID | WP_001063460.1 | Uniprot ID | - |
| Organism | Streptococcus oralis subsp. dentisani strain F0392 | ||
| Function | repress competence development (at the early growth phase) (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1723405..1735501
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EJF26_RS08840 | - | 1723519..1724364 (+) | 846 | WP_000273572.1 | undecaprenyl-diphosphate phosphatase | - |
| EJF26_RS08845 | dinB | 1724398..1725459 (-) | 1062 | WP_000904551.1 | DNA polymerase IV | - |
| EJF26_RS08850 | pflB | 1725696..1728011 (+) | 2316 | WP_000260613.1 | formate C-acetyltransferase | - |
| EJF26_RS08855 | clpE | 1728405..1730501 (+) | 2097 | WP_001063460.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| EJF26_RS08860 | - | 1730560..1731042 (-) | 483 | WP_000032543.1 | S-ribosylhomocysteine lyase | - |
| EJF26_RS08865 | - | 1731318..1732025 (+) | 708 | WP_000400711.1 | ABC transporter ATP-binding protein | - |
| EJF26_RS08870 | - | 1732027..1732815 (+) | 789 | WP_000665371.1 | lantibiotic ABC transporter permease | - |
| EJF26_RS08875 | - | 1732815..1733537 (+) | 723 | WP_000588275.1 | hypothetical protein | - |
| EJF26_RS08880 | - | 1733550..1734248 (+) | 699 | WP_000422321.1 | response regulator transcription factor | - |
| EJF26_RS08885 | - | 1734215..1735246 (+) | 1032 | WP_001007869.1 | sensor histidine kinase KdpD | - |
Sequence
Protein
Download Length: 698 a.a. Molecular weight: 77242.04 Da Isoelectric Point: 4.7690
>NTDB_id=331394 EJF26_RS08855 WP_001063460.1 1728405..1730501(+) (clpE) [Streptococcus oralis subsp. dentisani strain F0392]
MNNNFNNMDDLFNQLMGGMRGYSSENRRYLINGREVTPEEFAQYRATGQLPRNAESDAQMQQHASGMKQDGVLAKLGRNL
TAEAREGKLDPVIGRNKEIQETSEILSRRTKNNPVLVGDAGVGKTAVVEGLAQAIVNGDVPAAIKNKEIISIDISGLEAG
TQYRGSFEENVQNLVNEVKEAGNIILFFDEIHQILGAGSIGGDSGSKGLADILKPALSRGELTVIGATTQDEYRNTILKN
AALARRFNEVKVNAPSAEDTFKILQGIRDLYQQHHNVILPDEVLKAAVDYSIQYIPQRSLPDKAIDLVDVTAAHLAAQHP
VTDVHAVEREIEAEKDKQEKAVEAEDFEAALNAKTRIAELEKKVENHTEDMKVTASINDVAESVERMTGIPVSQMGASDI
ERLKDMAHRLEHKVIGQDKAVEAVARAIRRNRAGFDEGNRPIGSFLFVGPTGVGKTELAKQLALDMFGTKDAIIRLDMSE
YSDRTAVSKLIGTTAGYVGYDDNSNTLTERVRRNPYSIILLDEIEKADPQVITLLLQVLDDGRLTDGQGNTVNFKNTVII
ATSNAGFGYEANLTEDADKPELMDRLKPFFRPEFLNRFNAVIEFSHLNKEDLSKIVDLMLAEVNQTLAKKDIDLEVSQAA
KDFITEEGYDEVMGVRPLRRVVEQQIRDKVTDFHLDHLDAKHLEADMEDGVLVIREKA
MNNNFNNMDDLFNQLMGGMRGYSSENRRYLINGREVTPEEFAQYRATGQLPRNAESDAQMQQHASGMKQDGVLAKLGRNL
TAEAREGKLDPVIGRNKEIQETSEILSRRTKNNPVLVGDAGVGKTAVVEGLAQAIVNGDVPAAIKNKEIISIDISGLEAG
TQYRGSFEENVQNLVNEVKEAGNIILFFDEIHQILGAGSIGGDSGSKGLADILKPALSRGELTVIGATTQDEYRNTILKN
AALARRFNEVKVNAPSAEDTFKILQGIRDLYQQHHNVILPDEVLKAAVDYSIQYIPQRSLPDKAIDLVDVTAAHLAAQHP
VTDVHAVEREIEAEKDKQEKAVEAEDFEAALNAKTRIAELEKKVENHTEDMKVTASINDVAESVERMTGIPVSQMGASDI
ERLKDMAHRLEHKVIGQDKAVEAVARAIRRNRAGFDEGNRPIGSFLFVGPTGVGKTELAKQLALDMFGTKDAIIRLDMSE
YSDRTAVSKLIGTTAGYVGYDDNSNTLTERVRRNPYSIILLDEIEKADPQVITLLLQVLDDGRLTDGQGNTVNFKNTVII
ATSNAGFGYEANLTEDADKPELMDRLKPFFRPEFLNRFNAVIEFSHLNKEDLSKIVDLMLAEVNQTLAKKDIDLEVSQAA
KDFITEEGYDEVMGVRPLRRVVEQQIRDKVTDFHLDHLDAKHLEADMEDGVLVIREKA
Nucleotide
Download Length: 2097 bp
>NTDB_id=331394 EJF26_RS08855 WP_001063460.1 1728405..1730501(+) (clpE) [Streptococcus oralis subsp. dentisani strain F0392]
ATGAACAACAACTTTAACAACATGGATGATTTATTTAACCAATTGATGGGAGGTATGCGAGGATATAGTTCTGAAAATCG
TCGCTACTTGATTAATGGACGTGAAGTGACACCTGAGGAATTTGCTCAGTATCGTGCAACTGGTCAATTACCAAGAAATG
CAGAATCTGATGCGCAAATGCAACAACACGCTTCAGGTATGAAACAAGACGGTGTCCTTGCTAAACTAGGTCGTAACCTG
ACAGCGGAAGCTCGTGAGGGCAAGTTGGATCCTGTTATCGGACGAAACAAGGAAATTCAAGAAACATCTGAAATCCTCTC
ACGTCGTACGAAAAATAATCCTGTTCTAGTCGGAGATGCAGGTGTTGGTAAGACAGCCGTTGTCGAAGGTCTAGCACAAG
CGATTGTGAATGGAGATGTTCCGGCTGCCATCAAGAACAAGGAAATTATTTCTATTGATATCTCAGGTCTTGAGGCTGGT
ACTCAATACCGTGGTAGCTTTGAAGAAAACGTTCAAAATCTAGTCAACGAAGTGAAAGAAGCAGGAAATATCATCCTCTT
CTTTGATGAAATTCACCAAATCCTTGGTGCTGGTTCAATCGGAGGCGATAGTGGTTCTAAAGGTCTTGCAGATATTCTCA
AACCAGCTCTCTCTCGAGGTGAGTTGACAGTTATCGGGGCAACGACTCAAGACGAATATCGTAACACTATCTTGAAAAAT
GCAGCTCTTGCTCGTCGTTTCAACGAAGTCAAGGTCAATGCTCCTTCAGCAGAGGATACCTTTAAAATCCTTCAAGGGAT
TCGTGACCTCTATCAACAACATCACAATGTTATCTTGCCAGACGAAGTCTTAAAAGCAGCAGTGGATTATTCTATCCAAT
ACATTCCACAACGCAGCTTGCCAGATAAGGCTATCGACCTTGTCGATGTAACGGCAGCTCACTTGGCAGCTCAACATCCT
GTAACAGATGTGCATGCTGTTGAACGGGAAATTGAAGCAGAAAAAGACAAGCAAGAAAAAGCAGTTGAGGCAGAAGACTT
TGAAGCAGCTCTCAATGCTAAAACACGTATTGCAGAATTAGAGAAAAAAGTCGAAAACCACACAGAAGACATGAAAGTAA
CTGCAAGCATCAACGATGTGGCTGAGTCTGTAGAACGAATGACAGGTATTCCGGTATCTCAAATGGGAGCATCCGACATC
GAACGTTTGAAAGATATGGCTCATCGTTTGGAACACAAGGTTATCGGTCAAGATAAGGCAGTTGAAGCAGTAGCTCGTGC
TATCCGTCGTAACCGTGCAGGTTTTGATGAAGGCAATCGCCCAATCGGTAGCTTCCTCTTTGTAGGGCCTACTGGGGTTG
GTAAGACGGAGCTTGCTAAACAATTGGCGCTTGATATGTTTGGAACCAAGGATGCGATCATCCGTTTGGATATGTCTGAA
TACAGTGACCGCACAGCTGTTTCTAAGTTGATCGGTACAACAGCTGGTTATGTTGGGTATGATGACAATAGCAATACCTT
GACAGAACGTGTTCGTCGCAATCCATACTCTATCATTCTCTTGGACGAGATTGAAAAAGCTGATCCTCAAGTAATCACCC
TTCTCCTCCAAGTCTTGGATGATGGTCGTTTGACTGACGGTCAAGGAAATACCGTTAACTTTAAAAACACTGTCATTATC
GCAACATCAAATGCTGGATTTGGCTATGAAGCCAACTTGACGGAAGATGCGGATAAACCAGAATTAATGGATCGTTTGAA
ACCATTCTTCCGTCCAGAATTCCTTAACCGCTTTAACGCAGTTATCGAGTTCTCACACTTGAATAAGGAAGACCTTTCTA
AGATTGTGGACTTGATGTTGGCGGAAGTCAACCAAACCTTGGCTAAGAAAGACATTGATTTGGAAGTCAGCCAAGCAGCT
AAGGACTTTATCACAGAAGAAGGTTATGACGAAGTCATGGGTGTTCGTCCACTCCGCCGTGTGGTTGAACAACAAATTCG
TGATAAGGTAACAGATTTCCACTTGGATCATCTAGATGCCAAACATTTGGAAGCAGACATGGAAGATGGCGTTTTGGTCA
TTCGTGAAAAAGCCTAA
ATGAACAACAACTTTAACAACATGGATGATTTATTTAACCAATTGATGGGAGGTATGCGAGGATATAGTTCTGAAAATCG
TCGCTACTTGATTAATGGACGTGAAGTGACACCTGAGGAATTTGCTCAGTATCGTGCAACTGGTCAATTACCAAGAAATG
CAGAATCTGATGCGCAAATGCAACAACACGCTTCAGGTATGAAACAAGACGGTGTCCTTGCTAAACTAGGTCGTAACCTG
ACAGCGGAAGCTCGTGAGGGCAAGTTGGATCCTGTTATCGGACGAAACAAGGAAATTCAAGAAACATCTGAAATCCTCTC
ACGTCGTACGAAAAATAATCCTGTTCTAGTCGGAGATGCAGGTGTTGGTAAGACAGCCGTTGTCGAAGGTCTAGCACAAG
CGATTGTGAATGGAGATGTTCCGGCTGCCATCAAGAACAAGGAAATTATTTCTATTGATATCTCAGGTCTTGAGGCTGGT
ACTCAATACCGTGGTAGCTTTGAAGAAAACGTTCAAAATCTAGTCAACGAAGTGAAAGAAGCAGGAAATATCATCCTCTT
CTTTGATGAAATTCACCAAATCCTTGGTGCTGGTTCAATCGGAGGCGATAGTGGTTCTAAAGGTCTTGCAGATATTCTCA
AACCAGCTCTCTCTCGAGGTGAGTTGACAGTTATCGGGGCAACGACTCAAGACGAATATCGTAACACTATCTTGAAAAAT
GCAGCTCTTGCTCGTCGTTTCAACGAAGTCAAGGTCAATGCTCCTTCAGCAGAGGATACCTTTAAAATCCTTCAAGGGAT
TCGTGACCTCTATCAACAACATCACAATGTTATCTTGCCAGACGAAGTCTTAAAAGCAGCAGTGGATTATTCTATCCAAT
ACATTCCACAACGCAGCTTGCCAGATAAGGCTATCGACCTTGTCGATGTAACGGCAGCTCACTTGGCAGCTCAACATCCT
GTAACAGATGTGCATGCTGTTGAACGGGAAATTGAAGCAGAAAAAGACAAGCAAGAAAAAGCAGTTGAGGCAGAAGACTT
TGAAGCAGCTCTCAATGCTAAAACACGTATTGCAGAATTAGAGAAAAAAGTCGAAAACCACACAGAAGACATGAAAGTAA
CTGCAAGCATCAACGATGTGGCTGAGTCTGTAGAACGAATGACAGGTATTCCGGTATCTCAAATGGGAGCATCCGACATC
GAACGTTTGAAAGATATGGCTCATCGTTTGGAACACAAGGTTATCGGTCAAGATAAGGCAGTTGAAGCAGTAGCTCGTGC
TATCCGTCGTAACCGTGCAGGTTTTGATGAAGGCAATCGCCCAATCGGTAGCTTCCTCTTTGTAGGGCCTACTGGGGTTG
GTAAGACGGAGCTTGCTAAACAATTGGCGCTTGATATGTTTGGAACCAAGGATGCGATCATCCGTTTGGATATGTCTGAA
TACAGTGACCGCACAGCTGTTTCTAAGTTGATCGGTACAACAGCTGGTTATGTTGGGTATGATGACAATAGCAATACCTT
GACAGAACGTGTTCGTCGCAATCCATACTCTATCATTCTCTTGGACGAGATTGAAAAAGCTGATCCTCAAGTAATCACCC
TTCTCCTCCAAGTCTTGGATGATGGTCGTTTGACTGACGGTCAAGGAAATACCGTTAACTTTAAAAACACTGTCATTATC
GCAACATCAAATGCTGGATTTGGCTATGAAGCCAACTTGACGGAAGATGCGGATAAACCAGAATTAATGGATCGTTTGAA
ACCATTCTTCCGTCCAGAATTCCTTAACCGCTTTAACGCAGTTATCGAGTTCTCACACTTGAATAAGGAAGACCTTTCTA
AGATTGTGGACTTGATGTTGGCGGAAGTCAACCAAACCTTGGCTAAGAAAGACATTGATTTGGAAGTCAGCCAAGCAGCT
AAGGACTTTATCACAGAAGAAGGTTATGACGAAGTCATGGGTGTTCGTCCACTCCGCCGTGTGGTTGAACAACAAATTCG
TGATAAGGTAACAGATTTCCACTTGGATCATCTAGATGCCAAACATTTGGAAGCAGACATGGAAGATGGCGTTTTGGTCA
TTCGTGAAAAAGCCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpE | Streptococcus mutans UA159 |
47.932 |
100 |
0.481 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
47.776 |
99.857 |
0.477 |
| clpE | Streptococcus pneumoniae Rx1 |
48.976 |
90.974 |
0.446 |
| clpE | Streptococcus pneumoniae D39 |
48.976 |
90.974 |
0.446 |
| clpE | Streptococcus pneumoniae R6 |
48.976 |
90.974 |
0.446 |
| clpE | Streptococcus pneumoniae TIGR4 |
48.896 |
90.831 |
0.444 |
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
45.146 |
92.98 |
0.42 |
| clpC | Streptococcus pneumoniae D39 |
43.109 |
89.398 |
0.385 |
| clpC | Streptococcus pneumoniae Rx1 |
43.109 |
89.398 |
0.385 |
| clpC | Streptococcus pneumoniae TIGR4 |
42.949 |
89.398 |
0.384 |
| clpC | Streptococcus thermophilus LMD-9 |
43.112 |
88.395 |
0.381 |
| clpC | Streptococcus thermophilus LMG 18311 |
42.95 |
88.395 |
0.38 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
42.788 |
88.395 |
0.378 |
| clpC | Streptococcus mutans UA159 |
42.071 |
88.539 |
0.372 |