Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   EJF26_RS08705 Genome accession   NZ_CP034442
Coordinates   1699107..1700867 (+) Length   586 a.a.
NCBI ID   WP_000428380.1    Uniprot ID   F9NYU9
Organism   Streptococcus oralis subsp. dentisani strain F0392     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1694107..1705867
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EJF26_RS08685 - 1695243..1695959 (+) 717 WP_000532888.1 YebC/PmpR family DNA-binding transcriptional regulator -
  EJF26_RS08690 - 1696009..1696713 (-) 705 WP_000675585.1 DUF308 domain-containing protein -
  EJF26_RS08695 - 1696903..1697364 (+) 462 WP_000360515.1 MarR family winged helix-turn-helix transcriptional regulator -
  EJF26_RS08700 rcrP 1697348..1699117 (+) 1770 WP_000731795.1 ABC transporter ATP-binding protein Regulator
  EJF26_RS08705 rcrQ 1699107..1700867 (+) 1761 WP_000428380.1 ABC transporter ATP-binding protein Regulator
  EJF26_RS08710 - 1700933..1701295 (+) 363 WP_000078812.1 DUF2200 domain-containing protein -
  EJF26_RS08715 - 1701292..1701795 (+) 504 WP_000800918.1 phosphatase PAP2 family protein -
  EJF26_RS08720 - 1701909..1702355 (+) 447 WP_000776585.1 LytTR family DNA-binding domain-containing protein -
  EJF26_RS08725 - 1702361..1703035 (+) 675 WP_000725735.1 LiaF transmembrane domain-containing protein -
  EJF26_RS08730 rpmB 1703141..1703329 (+) 189 WP_001140948.1 50S ribosomal protein L28 -
  EJF26_RS08735 - 1703482..1703847 (+) 366 WP_000216441.1 Asp23/Gls24 family envelope stress response protein -
  EJF26_RS08740 - 1703850..1705517 (+) 1668 WP_000036653.1 DAK2 domain-containing protein -
  EJF26_RS08745 - 1705642..1705848 (+) 207 WP_025168956.1 hypothetical protein -

Sequence

Protein


Download         Length: 586 a.a.        Molecular weight: 64696.49 Da        Isoelectric Point: 5.4398

>NTDB_id=331393 EJF26_RS08705 WP_000428380.1 1699107..1700867(+) (rcrQ) [Streptococcus oralis subsp. dentisani strain F0392]
MENKKVSFWKQCKPYMAGLQLPLLIAVVAAVISSIITVYGPTKIKEITNLISDGLATEINLVAVSNIAGFLVVLYVFGAI
LNYTQAYIFSTSIQHFSKRLRTAIAEKINRLPLGYFDRHSQGDTLSRVTNDVDTAAQSLNQSLGTVLSASFLLIAVLVTM
FEMNWILALVTVVSTLVGFAAVSVIMAKSQGYFKAQQNNLAAVNGYVEEMYSGHNVVTSYNAVNTSKARFAGLNQDLHDS
IWKSQFISGIMMPAMFFVGNFSYVLVIIVGAALALEGHITIGIIVAFMVYVRTFSQPLSQIAQGITSLQQASAAMTRVLE
FLAEAEMQDESHKNRQLAHMKGEVVFDHVSFGYIPERTIIHDFSATAHAGQKVAIVGPTGAGKTTIVNLLMKFYEIDKGS
IRIDGVDTKDMKRSEVHDAFSMVLQDTWLFEGTIRENLIYNQTDISDERMMEASKAVGIHHFIMTLPDGYDTVLDDTVTL
SVGQKQLLTIARALLKDAPLLILDEATSSVDTRTEELIQKAMDRLMEGRTSFVIAHRLSTIRNADLILVMKDGNIIEQGN
HEELMAQGGFYADLYNSQFTEDEAEE

Nucleotide


Download         Length: 1761 bp        

>NTDB_id=331393 EJF26_RS08705 WP_000428380.1 1699107..1700867(+) (rcrQ) [Streptococcus oralis subsp. dentisani strain F0392]
ATGGAAAATAAAAAAGTGTCGTTCTGGAAACAGTGCAAACCTTATATGGCAGGCCTCCAACTCCCTCTTCTAATAGCAGT
TGTGGCTGCAGTCATTTCAAGCATCATTACTGTTTATGGGCCAACTAAGATTAAAGAAATTACTAACTTGATTTCAGATG
GTTTGGCTACAGAAATCAACTTGGTAGCTGTATCAAACATTGCTGGATTTTTAGTTGTCCTATATGTATTTGGAGCTATC
CTTAACTATACACAGGCCTATATCTTTTCAACGAGCATTCAGCATTTTTCAAAACGCTTGCGGACGGCTATCGCTGAAAA
GATTAATCGTTTGCCACTTGGCTATTTTGACCGTCATTCACAAGGAGATACCCTTTCGCGCGTGACCAATGATGTGGATA
CAGCAGCGCAATCTCTCAACCAAAGTCTTGGGACAGTTCTTTCAGCTAGTTTCTTGTTGATTGCTGTCTTGGTGACCATG
TTTGAGATGAACTGGATTTTGGCATTGGTAACAGTTGTATCAACCCTTGTTGGTTTTGCGGCGGTTTCCGTAATCATGGC
CAAGTCACAGGGTTATTTTAAAGCTCAACAAAATAATCTAGCGGCCGTCAATGGTTATGTGGAAGAGATGTACTCTGGCC
ATAATGTAGTGACCAGCTACAACGCTGTGAACACCTCCAAAGCAAGATTTGCAGGTTTAAATCAAGACTTGCATGATAGT
ATCTGGAAATCTCAGTTTATCTCTGGTATCATGATGCCAGCTATGTTCTTTGTTGGAAACTTTAGTTATGTATTAGTCAT
CATCGTTGGAGCTGCGCTGGCGTTAGAAGGGCATATCACAATAGGGATTATTGTAGCCTTTATGGTTTACGTACGGACCT
TCTCCCAACCTCTGTCACAGATTGCCCAAGGGATTACGAGCCTGCAACAAGCGAGTGCAGCCATGACTCGTGTATTAGAA
TTTCTAGCTGAAGCAGAGATGCAGGATGAATCTCATAAGAACAGACAATTGGCCCATATGAAAGGGGAAGTGGTTTTTGA
TCACGTGTCCTTTGGCTATATACCAGAGCGCACCATCATCCATGACTTTTCTGCGACGGCTCATGCAGGTCAGAAAGTCG
CTATCGTTGGACCGACTGGGGCTGGTAAGACAACCATTGTCAATCTTTTGATGAAGTTCTATGAGATAGATAAGGGAAGT
ATCCGTATCGATGGTGTGGATACCAAGGACATGAAGCGTTCAGAAGTGCATGATGCCTTTTCTATGGTCTTGCAGGACAC
TTGGCTCTTTGAAGGAACGATTCGAGAGAACTTGATCTATAATCAGACAGACATCAGTGATGAACGAATGATGGAAGCCA
GCAAGGCTGTGGGAATCCACCACTTTATCATGACTTTGCCAGATGGCTACGATACTGTTTTGGATGATACCGTGACCTTG
TCTGTCGGACAGAAACAGCTCTTGACCATTGCTCGTGCCCTTCTCAAGGATGCACCGCTCTTGATTTTGGACGAGGCGAC
ATCCTCAGTCGACACACGTACAGAGGAATTGATTCAAAAAGCCATGGACCGTTTGATGGAAGGACGCACATCCTTTGTCA
TTGCCCACCGCTTGTCAACCATCCGTAACGCTGACTTGATTCTGGTCATGAAAGATGGCAATATCATCGAACAAGGCAAC
CACGAGGAGCTGATGGCGCAAGGTGGCTTCTATGCTGACTTGTACAATAGTCAGTTTACAGAAGACGAAGCAGAAGAATA
A

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(361-508)

ABC transporter transmembrane region (ABC_membrane)

(23-298)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB F9NYU9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

66.781

99.659

0.666

Multiple sequence alignment