Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   EJF26_RS08700 Genome accession   NZ_CP034442
Coordinates   1697348..1699117 (+) Length   589 a.a.
NCBI ID   WP_000731795.1    Uniprot ID   F9NYV0
Organism   Streptococcus oralis subsp. dentisani strain F0392     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1692348..1704117
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EJF26_RS08675 - 1693112..1693666 (-) 555 WP_000060279.1 GNAT family N-acetyltransferase -
  EJF26_RS08680 - 1693776..1695146 (+) 1371 WP_001036201.1 MATE family efflux transporter -
  EJF26_RS08685 - 1695243..1695959 (+) 717 WP_000532888.1 YebC/PmpR family DNA-binding transcriptional regulator -
  EJF26_RS08690 - 1696009..1696713 (-) 705 WP_000675585.1 DUF308 domain-containing protein -
  EJF26_RS08695 - 1696903..1697364 (+) 462 WP_000360515.1 MarR family winged helix-turn-helix transcriptional regulator -
  EJF26_RS08700 rcrP 1697348..1699117 (+) 1770 WP_000731795.1 ABC transporter ATP-binding protein Regulator
  EJF26_RS08705 rcrQ 1699107..1700867 (+) 1761 WP_000428380.1 ABC transporter ATP-binding protein Regulator
  EJF26_RS08710 - 1700933..1701295 (+) 363 WP_000078812.1 DUF2200 domain-containing protein -
  EJF26_RS08715 - 1701292..1701795 (+) 504 WP_000800918.1 phosphatase PAP2 family protein -
  EJF26_RS08720 - 1701909..1702355 (+) 447 WP_000776585.1 LytTR family DNA-binding domain-containing protein -
  EJF26_RS08725 - 1702361..1703035 (+) 675 WP_000725735.1 LiaF transmembrane domain-containing protein -
  EJF26_RS08730 rpmB 1703141..1703329 (+) 189 WP_001140948.1 50S ribosomal protein L28 -
  EJF26_RS08735 - 1703482..1703847 (+) 366 WP_000216441.1 Asp23/Gls24 family envelope stress response protein -

Sequence

Protein


Download         Length: 589 a.a.        Molecular weight: 65465.89 Da        Isoelectric Point: 6.6285

>NTDB_id=331392 EJF26_RS08700 WP_000731795.1 1697348..1699117(+) (rcrP) [Streptococcus oralis subsp. dentisani strain F0392]
MKKLAKRITGKEWGMIILTLLFTCFSVYLELEVPTYISQITELLGTSGTQLGELWSPAAKMIGLSLLAFFSSVMVGFFAA
RVAASYTTHLRRDVFHRVLDFSQTEIKRFSIPSLLTRTTNDITQVQMLFTMGLQVVTRGPIMAIWAIGKILGKSEYWLWA
VVVAVIVNVLMTTVLMTLAFPKQSVIQKLTDKLNSITRESLTGIRVVRAYNAEDYQDKKFEAANDEVTRLNLFVNRLMAI
MNPIMMGISSGLSLAIYWIGAYIINDASVTERLPLFSDMVVFMSYAMQVVMGFLLMGALFIVLPRTLVSAGRINQVLDLH
SSIENPSHAQTADPSVQGQVEFRDVTFRYSKNSEAVVEHVTFKAEAGQTVAFIGSTGSGKSTLVNLLPRFYDVSDGEILV
DGVNVQDYDLEDLRNKVGYIPQKAVLFSGDVKENLDFGKSKETPLSEAAMWQALELAQSKSFIEDKEAGLASEVAQGGTN
FSGGQRQRLAIARALARKPEILIFDDSFSALDYKTDRVLRQELAQKTKSMTKLIVAQRISTIMDADLILVLDQGKVVGQG
THKELLATNEVYQEIAYSQLSKEELEHGK

Nucleotide


Download         Length: 1770 bp        

>NTDB_id=331392 EJF26_RS08700 WP_000731795.1 1697348..1699117(+) (rcrP) [Streptococcus oralis subsp. dentisani strain F0392]
ATGAAGAAACTCGCTAAACGTATTACAGGAAAAGAGTGGGGGATGATAATCCTTACGCTTCTTTTCACTTGTTTCTCGGT
CTATCTCGAGTTAGAGGTGCCGACCTATATTTCACAAATTACAGAATTACTCGGAACATCTGGAACGCAGTTGGGTGAAC
TCTGGTCACCAGCTGCGAAGATGATTGGTTTGTCTTTATTGGCTTTCTTTTCATCTGTTATGGTTGGTTTCTTTGCCGCT
CGCGTTGCAGCATCCTATACAACCCATCTACGTAGAGACGTATTTCATCGCGTTTTAGATTTTTCGCAGACAGAAATCAA
GCGCTTTTCAATCCCAAGTCTTTTGACTCGGACGACCAATGATATTACCCAGGTACAGATGCTCTTTACCATGGGCTTGC
AGGTGGTTACTCGTGGGCCAATTATGGCTATCTGGGCCATTGGAAAAATCCTTGGGAAATCGGAATACTGGCTCTGGGCG
GTCGTTGTAGCTGTTATTGTCAATGTCTTGATGACCACCGTTCTTATGACTCTGGCCTTTCCAAAACAATCGGTCATCCA
AAAATTGACAGATAAACTCAATAGCATCACTCGTGAAAGTTTGACTGGGATTCGAGTTGTTCGCGCATACAATGCCGAGG
ATTACCAAGATAAGAAATTTGAAGCAGCCAACGATGAGGTAACGCGTCTCAATCTCTTTGTCAATCGATTGATGGCGATT
ATGAACCCGATTATGATGGGGATTTCCAGTGGATTAAGTTTAGCCATTTACTGGATTGGTGCCTATATCATCAACGATGC
AAGTGTGACAGAACGTCTGCCACTCTTTAGTGATATGGTGGTCTTCATGTCCTATGCTATGCAGGTCGTAATGGGATTCC
TTCTCATGGGAGCACTCTTTATCGTTCTTCCTCGTACCTTGGTTTCGGCAGGACGTATCAATCAAGTATTGGATCTGCAT
TCTTCTATTGAAAATCCTAGTCATGCACAGACAGCGGATCCTTCAGTTCAAGGACAAGTGGAATTCCGTGATGTGACTTT
CCGCTACTCTAAAAACTCTGAAGCAGTCGTGGAACATGTCACTTTCAAAGCAGAAGCGGGTCAAACCGTGGCTTTCATCG
GATCGACTGGATCAGGTAAATCTACGCTTGTCAACCTCTTGCCACGTTTTTATGATGTTTCAGATGGAGAAATCCTAGTG
GACGGAGTTAATGTTCAAGATTACGATTTGGAAGATTTGCGCAATAAGGTCGGCTATATTCCACAAAAAGCTGTCCTCTT
TTCTGGAGATGTCAAGGAGAACTTAGACTTTGGTAAGAGCAAAGAAACTCCTCTAAGCGAAGCTGCTATGTGGCAAGCTC
TAGAATTGGCCCAGTCTAAAAGCTTCATCGAGGATAAGGAAGCAGGACTTGCATCAGAAGTGGCCCAAGGCGGAACCAAC
TTCTCAGGAGGTCAAAGACAGCGTTTGGCCATTGCGCGTGCCTTGGCTCGTAAACCAGAGATTCTCATCTTTGATGACTC
TTTCTCAGCCTTGGACTACAAGACAGATCGTGTCCTGCGCCAAGAGCTAGCTCAGAAAACAAAATCCATGACCAAGCTCA
TCGTAGCGCAGCGGATTTCTACCATTATGGATGCTGACCTGATCTTAGTATTGGATCAAGGAAAAGTCGTGGGACAAGGC
ACCCACAAGGAACTTCTAGCTACCAACGAAGTCTACCAAGAAATTGCCTACTCACAACTATCGAAGGAGGAATTGGAACA
TGGAAAATAA

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(17-292)

ABC transporter (ABC_tran)

(358-507)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB F9NYV0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

65.225

100

0.666

Multiple sequence alignment