Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   EJF26_RS05360 Genome accession   NZ_CP034442
Coordinates   1062567..1063298 (-) Length   243 a.a.
NCBI ID   WP_000889931.1    Uniprot ID   F9P378
Organism   Streptococcus oralis subsp. dentisani strain F0392     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1057567..1068298
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EJF26_RS05325 - 1057655..1057954 (-) 300 WP_001041394.1 YlxQ-related RNA-binding protein -
  EJF26_RS05330 rnpM 1057947..1058240 (-) 294 WP_000857560.1 RNase P modulator RnpM -
  EJF26_RS05335 nusA 1058262..1059398 (-) 1137 WP_000032279.1 transcription termination factor NusA -
  EJF26_RS05340 rimP 1059441..1059920 (-) 480 WP_000379537.1 ribosome maturation factor RimP -
  EJF26_RS05345 trmB 1060047..1060682 (-) 636 WP_001266091.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  EJF26_RS05350 ccrZ 1060679..1061473 (-) 795 WP_000363012.1 cell cycle regulator CcrZ -
  EJF26_RS05355 - 1061521..1062570 (-) 1050 WP_000653792.1 ABC transporter permease -
  EJF26_RS05360 pptA 1062567..1063298 (-) 732 WP_000889931.1 ABC transporter ATP-binding protein Regulator
  EJF26_RS05365 - 1063366..1063776 (+) 411 WP_000063760.1 HIT family protein -
  EJF26_RS05370 - 1063786..1064064 (+) 279 WP_000777766.1 hypothetical protein -
  EJF26_RS05375 - 1064128..1064787 (+) 660 WP_000865429.1 hypothetical protein -
  EJF26_RS05380 dnaJ 1064867..1066003 (-) 1137 WP_001066320.1 molecular chaperone DnaJ -
  EJF26_RS05385 - 1066155..1066787 (-) 633 WP_000756351.1 DJ-1/PfpI family protein -

Sequence

Protein


Download         Length: 243 a.a.        Molecular weight: 27101.55 Da        Isoelectric Point: 4.7925

>NTDB_id=331349 EJF26_RS05360 WP_000889931.1 1062567..1063298(-) (pptA) [Streptococcus oralis subsp. dentisani strain F0392]
MLEIKNLTGGYVHVPVLKDVSFTVESGQLVGLIGLNGAGKSTTINEIIGLLTPYSGEIKINGLNLREDATNYRKQIGYIP
ETPSLYEELTLREHIETVAMAYGIEQKVAFDRVGPLLKMFRLDQKLDWFPVRFSKGMKQKVMIICAFVVDPSLFIVDEPF
LGLDPLAISDLIQLLEAEKQKGKSILMSTHVLDSAEKMCDAFVILHKGEVRAQGNLEQLREAFDMPEASLNDIYLALTKE
EGL

Nucleotide


Download         Length: 732 bp        

>NTDB_id=331349 EJF26_RS05360 WP_000889931.1 1062567..1063298(-) (pptA) [Streptococcus oralis subsp. dentisani strain F0392]
ATGTTAGAAATTAAAAACCTGACAGGAGGTTATGTTCACGTCCCTGTCTTGAAAGATGTGTCCTTTACAGTTGAAAGTGG
GCAGTTGGTCGGTTTGATTGGTCTCAATGGTGCTGGGAAATCAACGACAATCAATGAGATTATCGGTCTGTTGACACCTT
ACAGTGGAGAAATTAAGATTAACGGTCTCAACCTGCGAGAAGATGCGACCAACTACCGCAAGCAGATTGGTTATATCCCA
GAAACGCCTAGTCTGTATGAGGAATTGACCCTCAGAGAGCATATCGAGACGGTTGCCATGGCCTATGGTATTGAGCAAAA
AGTGGCTTTTGATCGTGTGGGACCTTTGTTAAAAATGTTTCGTTTGGATCAAAAATTAGACTGGTTCCCAGTGCGTTTTT
CCAAAGGGATGAAGCAGAAGGTCATGATTATCTGTGCCTTTGTCGTAGATCCGAGTCTTTTCATTGTTGATGAGCCTTTT
CTTGGGCTCGATCCGCTGGCTATTTCTGACTTGATTCAACTTTTGGAAGCAGAAAAACAAAAAGGCAAGTCCATTCTCAT
GAGTACCCACGTGCTGGATTCGGCGGAGAAGATGTGTGACGCCTTTGTTATTCTCCACAAGGGGGAGGTGCGGGCTCAGG
GGAATCTGGAGCAACTCCGCGAAGCCTTTGACATGCCTGAAGCGAGTTTGAATGATATTTACTTGGCTCTGACCAAAGAG
GAGGGGCTATGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB F9P378

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

72.614

99.177

0.72
  pptA Streptococcus thermophilus LMD-9

71.369

99.177

0.708

Multiple sequence alignment