Detailed information NTG0033121

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: HPSJM_RS07530
• Genome accession: NC_014560
• Coordinates: 1575251..1576690 (-)
• Length: 479 a.a.
• NCBI ID: WP_000748980.1
• Uniprot ID: -
• Organism: Helicobacter pylori SJM180
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1570251..1581690

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HPSJM_RS07505 (HPSJM_07775)	recG	1571383..1573254 (-)	1872	WP_001158341.1	ATP-dependent DNA helicase RecG	-
HPSJM_RS07510 (HPSJM_07780)	-	1573336..1573683 (+)	348	WP_000837035.1	hypothetical protein	-
HPSJM_RS07515 (HPSJM_07785)	-	1573687..1574322 (+)	636	WP_000765636.1	outer membrane protein	-
HPSJM_RS07520 (HPSJM_07790)	-	1574319..1575071 (-)	753	WP_000767512.1	exodeoxyribonuclease III	-
HPSJM_RS07530 (HPSJM_07795)	comH	1575251..1576690 (-)	1440	WP_000748980.1	hypothetical protein	Machinery gene
HPSJM_RS07540 (HPSJM_07800)	dnaA	1576919..1578286 (-)	1368	WP_000380620.1	chromosomal replication initiator protein DnaA	-
HPSJM_RS07545 (HPSJM_07805)	-	1578440..1578982 (+)	543	WP_013356483.1	purine-nucleoside phosphorylase	-
HPSJM_RS07550 (HPSJM_07810)	-	1579027..1579266 (+)	240	WP_000461837.1	DUF2443 domain-containing protein	-
HPSJM_RS07555 (HPSJM_07815)	glmS	1579267..1581060 (+)	1794	WP_000334411.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-

Sequence

Protein

• Length: 479 a.a.
• Molecular weight: 54804.76 Da
• Isoelectric Point: 6.9526

>NTDB_id=33121 HPSJM_RS07530 WP_000748980.1 1575251..1576690(-) (comH) [Helicobacter pylori SJM180]
MKKSLCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKEPRQVLGVYNISPHKKLTLTITHISTAIVYQPLDE
KLSLETTLNPNRPTIPRNTQIVFSSKELKEAHPHQMPSLNAPMQKPQNKPSSSQQSPQNFSYPEPKLGSKNSKNSLLQPL
AIPSKISPTNEVKTPTTDTKPPLKHSSEDQENNLFITPPTEKTLPNNTSNADINENNESNENRDNVEKQAVRDANVKEFA
CGKWVYDDENLQAYRPSILKRVDEDRQTATDITPCDYSTAENKSGKIITPYTKISIHKTEPLEEPQTFEAKNNFAILQAR
SSTEKCKRARARKDGTTRQCYLIEEPLKQAWESEYEITTQLVKAVYERPKQDDQVEPTFYETSELAYSSTRKSEITRNEL
NLNEKFMEFVEVYEGHYLNDIIKESSEYKEWVKNHVRFKEGVCMALEIEEQPRAKSTPLSIENSRVVCVKKGNYLFNEV

Nucleotide

• Length: 1440 bp

>NTDB_id=33121 HPSJM_RS07530 WP_000748980.1 1575251..1576690(-) (comH) [Helicobacter pylori SJM180]
ATGAAAAAATCCCTTTGTCTGTCTTTCTTTCTGACCTTCTCTAACCCTCTTCAAGCCCTTGTGATCGAGCTTTTAGAAGA
GATCAAAACTTCACCGCATAAAGGCACTTTTAAGGCTAAAGTCCTTGATTCTAAAGAACCAAGACAAGTTTTAGGCGTTT
ATAATATCTCCCCACACAAAAAACTCACGCTCACTATCACCCACATATCCACTGCAATCGTCTATCAACCCCTTGATGAA
AAACTTTCTTTAGAAACGACCTTAAACCCTAACCGCCCTACTATCCCTAGAAACACCCAAATCGTTTTTTCTTCAAAAGA
ATTGAAAGAAGCGCACCCGCACCAAATGCCTTCTTTAAACGCGCCCATGCAAAAACCACAAAATAAACCCAGCTCATCGC
AACAATCTCCTCAAAACTTTTCTTACCCAGAACCCAAACTAGGCTCTAAAAACTCTAAAAACAGCCTTTTGCAGCCTTTA
GCAATTCCTAGCAAAATAAGTCCCACTAACGAAGTTAAAACGCCAACAACCGACACTAAACCCCCTTTAAAGCATTCTTC
AGAAGATCAAGAAAACAACCTCTTTATAACGCCACCCACTGAAAAAACGCTCCCTAACAACACCTCTAACGCTGATATTA
ATGAAAACAATGAAAGTAACGAAAACAGGGATAATGTGGAAAAACAAGCCGTTAGAGATGCTAATGTTAAAGAATTTGCA
TGCGGGAAGTGGGTTTATGATGATGAAAATTTACAAGCCTATCGCCCAAGCATTTTAAAACGCGTTGATGAAGACAGACA
GACTGCGACAGATATTACCCCTTGCGATTACAGCACCGCTGAAAATAAAAGCGGTAAAATCATTACCCCCTATACTAAAA
TCTCTATTCATAAAACAGAGCCTTTAGAAGAGCCACAAACTTTTGAAGCTAAAAACAATTTCGCCATTCTTCAAGCCAGA
AGCTCTACAGAAAAATGTAAAAGGGCTAGAGCGAGAAAAGACGGCACGACTAGGCAATGCTATCTGATAGAAGAGCCTTT
AAAACAAGCATGGGAAAGTGAGTATGAAATCACCACACAATTAGTGAAAGCCGTATATGAACGCCCCAAACAAGACGATC
AAGTAGAGCCAACTTTTTATGAAACCAGCGAATTGGCTTATTCTTCCACACGAAAAAGCGAAATAACGCGCAATGAATTG
AATTTGAATGAAAAATTCATGGAATTTGTGGAAGTGTATGAGGGGCATTATTTAAACGATATAATCAAAGAGAGCAGCGA
ATACAAAGAATGGGTTAAAAACCATGTGCGCTTTAAAGAAGGGGTGTGCATGGCCTTAGAAATAGAAGAGCAACCACGAG
CTAAAAGCACGCCTTTGAGTATTGAAAACTCTCGTGTGGTGTGTGTCAAAAAGGGGAATTATTTATTCAACGAAGTTTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	96.451	100	0.965