Detailed information    

insolico Bioinformatically predicted

Overview


Name   kpsS   Type   Regulator
Locus tag   EJJ14_RS07765 Genome accession   NZ_CP034393
Coordinates   1476965..1478149 (-) Length   394 a.a.
NCBI ID   WP_002780434.1    Uniprot ID   A0A0U3A9V8
Organism   Campylobacter jejuni subsp. jejuni strain CLB104     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context


Location: 1471965..1483149
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EJJ14_RS07740 (EJJ14_07740) fliL 1473113..1473649 (+) 537 WP_002780442.1 flagellar basal body-associated protein FliL -
  EJJ14_RS07745 (EJJ14_07745) acpS 1473649..1473996 (+) 348 WP_002780441.1 holo-ACP synthase -
  EJJ14_RS07750 (EJJ14_07750) - 1473997..1474416 (-) 420 WP_002780440.1 hypothetical protein -
  EJJ14_RS07755 (EJJ14_07755) - 1474413..1475774 (-) 1362 WP_002780438.1 cytochrome P450 -
  EJJ14_RS07760 (EJJ14_07760) - 1475771..1476892 (-) 1122 WP_002780436.1 hypothetical protein -
  EJJ14_RS07765 (EJJ14_07765) kpsS 1476965..1478149 (-) 1185 WP_002780434.1 capsule polysaccharide modification protein KpsS Regulator
  EJJ14_RS07770 (EJJ14_07770) kpsC 1478146..1480218 (-) 2073 WP_002867280.1 capsular polysaccharide biosynthesis protein -
  EJJ14_RS07775 (EJJ14_07775) - 1480196..1482115 (-) 1920 WP_011049978.1 hypothetical protein -

Sequence


Protein


Download         Length: 394 a.a.        Molecular weight: 46824.57 Da        Isoelectric Point: 9.9369

>NTDB_id=331059 EJJ14_RS07765 WP_002780434.1 1476965..1478149(-) (kpsS) [Campylobacter jejuni subsp. jejuni strain CLB104]
MRFSTKIKKEFSGKNVLLLQGPVGNFFHHLAIKMKKKQTKVFKLNFNGGDFFFYPSGTRCKCDEKDLENFYRDFFQSKKI
DAILMYNDCRIIHAKAIKVAKELGIEIWIFEEGYLRPYCITLEKDGVNANSSLPRDKNFYLSQNIFTKESIKEIPGGFKF
MAFDAFLYWLFAFILAPFFNNKLHHRTLYPFEFLFWFRSLYRKYLYKITEKKLNEKIYNLEKKYFLAILQVYSDTQIKYH
YKKSIEHFIEETILSFANHARAKSYLVFKHHPMDRGYKNYSKLINDLSQKYHVEGRVLYVHDTHLPVLLRKALGCITINS
TVGLSAILEGCPTKVCGNAFYDFEGLSYPKKLQFFWREAHAYKPNPVLVCNFKKYLLQTNQFNGNFYKNFFLDK

Nucleotide


Download         Length: 1185 bp        

>NTDB_id=331059 EJJ14_RS07765 WP_002780434.1 1476965..1478149(-) (kpsS) [Campylobacter jejuni subsp. jejuni strain CLB104]
ATGAGATTTAGCACTAAAATTAAAAAAGAATTTAGCGGTAAAAATGTTTTACTCTTGCAAGGACCTGTGGGAAATTTTTT
TCATCATCTTGCAATAAAAATGAAAAAAAAACAAACCAAAGTTTTTAAACTCAATTTTAACGGTGGAGATTTTTTTTTCT
ATCCTAGTGGAACGAGGTGTAAGTGCGATGAAAAAGATCTTGAAAATTTCTATAGAGATTTTTTTCAAAGCAAAAAAATC
GATGCTATTTTAATGTATAATGATTGTCGTATTATCCATGCTAAGGCTATTAAAGTGGCTAAAGAATTAGGAATTGAAAT
ATGGATTTTTGAAGAAGGATATTTAAGGCCTTATTGTATTACTTTGGAAAAAGATGGGGTGAATGCAAATTCTTCTTTAC
CGCGTGATAAAAATTTTTATCTTTCTCAAAATATTTTTACCAAAGAAAGCATAAAAGAAATTCCAGGTGGATTTAAATTT
ATGGCTTTTGATGCTTTTTTGTATTGGTTGTTTGCTTTTATTTTGGCTCCATTTTTTAACAACAAACTTCATCATCGCAC
TTTATATCCTTTTGAATTTTTATTTTGGTTTAGATCATTGTATAGAAAGTATCTTTATAAGATTACAGAAAAAAAACTAA
ATGAAAAGATTTATAATTTAGAAAAAAAGTACTTTTTGGCGATTTTACAAGTTTATAGCGATACGCAAATTAAATATCAT
TACAAAAAAAGCATAGAGCACTTTATAGAGGAAACCATACTTTCTTTTGCAAACCATGCAAGAGCTAAATCTTATCTAGT
TTTTAAACACCATCCCATGGATAGGGGCTATAAGAATTATTCTAAACTCATAAATGATTTAAGTCAAAAATATCATGTAG
AAGGAAGGGTTTTATATGTTCATGATACCCACTTGCCAGTTCTTTTAAGAAAGGCTTTGGGTTGTATTACTATAAATTCA
ACAGTAGGCCTTAGTGCTATTTTAGAAGGCTGTCCGACTAAGGTTTGTGGCAATGCTTTTTATGATTTTGAAGGCTTATC
TTATCCAAAAAAACTTCAATTTTTTTGGCGTGAAGCTCATGCTTATAAACCCAATCCTGTTTTGGTATGTAATTTTAAAA
AATATCTTTTACAAACTAATCAATTCAACGGCAATTTTTATAAAAATTTCTTTTTAGACAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0U3A9V8

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kpsS Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

98.223

100

0.982


Multiple sequence alignment