Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   EJJ14_RS07185 Genome accession   NZ_CP034393
Coordinates   1376022..1376990 (+) Length   322 a.a.
NCBI ID   WP_002867310.1    Uniprot ID   A0AAW5EG90
Organism   Campylobacter jejuni subsp. jejuni strain CLB104     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1371022..1381990
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EJJ14_RS07160 (EJJ14_07160) cdsA 1371932..1372657 (-) 726 WP_002867314.1 phosphatidate cytidylyltransferase -
  EJJ14_RS07165 (EJJ14_07165) - 1372666..1373004 (-) 339 WP_002852397.1 hypothetical protein -
  EJJ14_RS07170 (EJJ14_07170) - 1373006..1374313 (-) 1308 WP_002914001.1 NFACT family protein -
  EJJ14_RS07175 (EJJ14_07175) mobA 1374375..1374950 (+) 576 WP_002867312.1 molybdenum cofactor guanylyltransferase -
  EJJ14_RS07180 (EJJ14_07180) pldA 1374947..1375936 (+) 990 WP_002867311.1 phospholipase A -
  EJJ14_RS07185 (EJJ14_07185) ceuB 1376022..1376990 (+) 969 WP_002867310.1 ABC transporter permease Machinery gene
  EJJ14_RS07190 (EJJ14_07190) ceuC 1376983..1377921 (+) 939 WP_002867309.1 iron chelate uptake ABC transporter family permease subunit -
  EJJ14_RS07195 (EJJ14_07195) ceuD 1377918..1378673 (+) 756 WP_002867308.1 ABC transporter ATP-binding protein -
  EJJ14_RS07200 (EJJ14_07200) ceuB 1378686..1379678 (+) 993 WP_002867307.1 enterochelin ABC transporter substrate-binding protein CeuB -
  EJJ14_RS07210 (EJJ14_07210) - 1379904..1380458 (-) 555 WP_002867306.1 membrane protein -

Sequence

Protein


Download         Length: 322 a.a.        Molecular weight: 35437.40 Da        Isoelectric Point: 9.6678

>NTDB_id=331057 EJJ14_RS07185 WP_002867310.1 1376022..1376990(+) (ceuB) [Campylobacter jejuni subsp. jejuni strain CLB104]
MFFKHILSLKVLIALLLFFGMISLFIGVISINVKDILNLNSTQLEIITLTRIPRLIAILLTGMSLSICGLIMQQLTQNKF
VSPTTAGTMDCAKFGILISLIFFTGASFFIQAIIASIFALLGSFIFIQILRKIKLKDVIFVPLIGLMFGGIISAITTFFA
YALNYIQNIQGWLQGSMANVMQGNYELLYISLPLFILAYFLAHKITIVGMGEDIALNLGISYNGILFLGLMIVSIITSLV
IVSVGIIPFLGLIIPNLVALYLGDNLRKNLIYIALCGALFLLVCDIIARLVIFPFEMPLSITTGVLGSLIFIFLLLKRKA
YA

Nucleotide


Download         Length: 969 bp        

>NTDB_id=331057 EJJ14_RS07185 WP_002867310.1 1376022..1376990(+) (ceuB) [Campylobacter jejuni subsp. jejuni strain CLB104]
TTGTTTTTTAAGCATATATTGAGTTTAAAAGTGCTTATAGCTTTACTTTTATTCTTTGGAATGATAAGTTTATTTATAGG
AGTTATCAGTATCAATGTAAAAGATATCCTTAATCTTAACTCCACTCAACTAGAAATCATAACCCTTACAAGAATTCCTA
GACTTATAGCGATTTTACTCACAGGAATGAGTCTTAGTATATGCGGGCTTATCATGCAACAACTCACGCAAAATAAATTC
GTTTCTCCAACTACGGCAGGAACTATGGATTGTGCTAAATTTGGCATACTTATTTCTTTAATATTTTTTACTGGAGCATC
TTTTTTCATTCAAGCTATCATTGCTTCTATATTTGCACTTTTGGGTTCTTTTATATTTATCCAAATTTTAAGAAAAATCA
AACTCAAAGATGTGATTTTTGTACCTTTGATAGGCTTGATGTTTGGAGGCATTATTAGTGCTATAACCACTTTTTTTGCC
TATGCTTTAAATTATATACAAAATATCCAAGGCTGGCTACAAGGCAGTATGGCAAATGTTATGCAGGGAAATTATGAATT
ACTTTACATTTCTTTGCCACTTTTTATACTTGCTTATTTTTTAGCTCACAAAATCACCATAGTTGGCATGGGCGAAGATA
TAGCTTTAAATCTTGGAATTTCTTATAATGGGATATTATTTTTAGGCTTGATGATTGTAAGCATTATCACTAGCTTAGTG
ATTGTAAGCGTTGGAATTATCCCTTTTTTAGGGCTAATTATCCCAAATTTAGTAGCTCTTTATCTAGGTGATAATCTTAG
AAAAAATCTTATCTATATAGCACTTTGTGGAGCTTTGTTTTTACTTGTTTGCGATATCATTGCAAGACTTGTCATCTTTC
CTTTTGAAATGCCTTTAAGTATCACTACAGGTGTTTTAGGATCTTTAATCTTTATCTTTCTTTTGCTAAAAAGGAAAGCT
TATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(15-317)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

98.758

100

0.988

Multiple sequence alignment