Detailed information NTG0330952

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: FRV13_RS18760
• Genome accession: NZ_CP042298
• Coordinates: 3380175..3381158 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196486.1
• Uniprot ID: A7ZT85
• Organism: Escherichia coli strain RM9088
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 3375175..3386158

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FRV13_RS18740 (FRV13_18745)	dppA	3376475..3378082 (+)	1608	WP_001222888.1	dipeptide ABC transporter substrate-binding protein DppA	-
FRV13_RS18750 (FRV13_18755)	dppB	3378233..3379252 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
FRV13_RS18755 (FRV13_18760)	dppC	3379262..3380164 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
FRV13_RS18760 (FRV13_18765)	amiE	3380175..3381158 (+)	984	WP_001196486.1	dipeptide ABC transporter ATP-binding protein	Regulator
FRV13_RS18765 (FRV13_18770)	dppF	3381155..3382159 (+)	1005	WP_000107012.1	dipeptide ABC transporter ATP-binding subunit DppF	-
FRV13_RS18770 (FRV13_18775)	yhjV	3382189..3383460 (-)	1272	WP_001295225.1	aromatic amino acid transport family protein	-
FRV13_RS18780 (FRV13_18785)	-	3383936..3384043 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
FRV13_RS18790 (FRV13_18795)	-	3384419..3384526 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
FRV13_RS18800 (FRV13_18805)	-	3384902..3385009 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
FRV13_RS18810 (FRV13_18815)	-	3385385..3385492 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35844.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=330952 FRV13_RS18760 WP_001196486.1 3380175..3381158(+) (amiE) [Escherichia coli strain RM9088]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=330952 FRV13_RS18760 WP_001196486.1 3380175..3381158(+) (amiE) [Escherichia coli strain RM9088]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCGCCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCCGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCAGAAAAACTGGAGTTTAACGGCCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCGACCACTGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGATC
TGGCTCTGGTGGCGGAAGCTGCGCATAAAATCATTGTGATGTATGCCGGTCAAGTGGTGGAAACGGGCGATGCTCACGCC
ATCTTCCATGCGCCGCGTCATCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTTT
GGCGTCGTTACCTGGCGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: A7ZT85

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404