Detailed information NTG0330765

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: FQB22_RS20540
• Genome accession: NZ_CP042252
• Coordinates: 3991345..3992475 (-)
• Length: 376 a.a.
• NCBI ID: WP_009327959.1
• Uniprot ID: Q65HV9
• Organism: Bacillus licheniformis strain KNU11
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3986345..3997475

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FQB22_RS20520	-	3987534..3987878 (-)	345	WP_003183123.1	hypothetical protein	-
FQB22_RS20525	-	3988141..3990327 (-)	2187	WP_003183125.1	RNA ligase	-
FQB22_RS20530	-	3990454..3990891 (-)	438	WP_003183127.1	Hsp20/alpha crystallin family protein	-
FQB22_RS20535	-	3991050..3991355 (-)	306	WP_003183128.1	hypothetical protein	-
FQB22_RS20540	rapC	3991345..3992475 (-)	1131	WP_009327959.1	Rap family tetratricopeptide repeat protein	Regulator
FQB22_RS20545	-	3992706..3993143 (-)	438	WP_003183133.1	peptidylprolyl isomerase	-
FQB22_RS20550	-	3993273..3994376 (+)	1104	WP_003183136.1	DUF1002 domain-containing protein	-
FQB22_RS20555	-	3994373..3995233 (-)	861	WP_003183139.1	poly-gamma-glutamate hydrolase family protein	-
FQB22_RS20560	lysA	3995472..3996791 (-)	1320	WP_003183141.1	diaminopimelate decarboxylase	-

Sequence

Protein

• Length: 376 a.a.
• Molecular weight: 44264.11 Da
• Isoelectric Point: 4.7199

>NTDB_id=330765 FQB22_RS20540 WP_009327959.1 3991345..3992475(-) (rapC) [Bacillus licheniformis strain KNU11]
MSVKIPSTAVGVKINDWYNAIRKFNVTDAEMLKAEIEREISQMEEDQDLLLYYALMEFRHRIMLDYVKPLEEGETPPDFS
EILKDIEDEQGKLTGLLEYYFNFFRGMYEYKNHDYIKAISFYRRAEKKLLHVEDEIERAEFHFKMAEVFYHMKQSHVSMN
YALQAIETYQAHETYTVRRIQCEFVIAGNYDDLESNEKALSHLEKALKLSQQEGQLILEGHTYYNLGNCYYKMGDFDQAA
EYFNRAAAIYQEESSDILPKAFFSLALAYFKLKQLEKADDALNKGIDIARRSDDAIYLSKFHFLKALYVDDDGRAPMLET
FQLLGSKKMYPDIEDLALEAAEYYNEIGRLSDSVYFYQTVFSARKQMKKGDWSYEI

Nucleotide

• Length: 1131 bp

>NTDB_id=330765 FQB22_RS20540 WP_009327959.1 3991345..3992475(-) (rapC) [Bacillus licheniformis strain KNU11]
GTGAGCGTAAAAATCCCATCGACGGCAGTCGGCGTAAAAATTAATGACTGGTATAACGCGATACGTAAATTCAACGTCAC
GGACGCCGAAATGCTGAAGGCAGAAATTGAGCGCGAAATTTCTCAAATGGAAGAGGATCAAGACTTATTATTGTATTACG
CCTTAATGGAATTCAGACACAGAATCATGCTTGATTACGTAAAACCTTTGGAAGAAGGCGAAACCCCGCCTGACTTTTCT
GAAATATTAAAAGATATCGAAGATGAACAAGGAAAGCTGACAGGCCTGCTCGAATATTATTTTAACTTTTTTAGAGGGAT
GTATGAATATAAAAACCATGATTATATTAAAGCGATCTCTTTTTACAGGCGCGCCGAAAAAAAGCTGCTGCACGTCGAGG
ACGAAATAGAGAGAGCCGAGTTTCATTTTAAAATGGCTGAAGTGTTTTATCATATGAAACAGAGCCATGTGTCGATGAAC
TATGCGCTTCAAGCGATTGAAACCTATCAGGCGCATGAAACCTACACGGTTCGGAGAATCCAATGCGAGTTCGTCATCGC
AGGGAACTATGACGATTTAGAGTCGAATGAAAAAGCGCTGTCACATCTTGAAAAGGCGCTGAAGCTTTCACAGCAAGAAG
GCCAGCTCATATTGGAAGGACACACCTATTACAATTTGGGAAACTGCTATTATAAGATGGGGGATTTCGATCAGGCAGCC
GAGTACTTCAACAGGGCTGCTGCGATTTATCAAGAAGAGTCATCAGATATTCTTCCAAAAGCGTTTTTCAGTCTTGCACT
TGCATATTTCAAGTTGAAGCAGCTGGAAAAGGCGGATGACGCGTTAAACAAAGGAATTGACATCGCCCGCCGATCAGACG
ATGCGATCTACCTTTCAAAATTTCATTTTTTAAAAGCTTTGTATGTTGATGATGACGGCAGGGCTCCAATGCTGGAGACA
TTTCAGCTGCTCGGGTCAAAAAAGATGTATCCCGATATTGAGGACTTGGCATTGGAAGCAGCTGAATACTATAATGAAAT
TGGGCGCTTGAGCGACTCTGTTTATTTCTATCAAACGGTATTCAGTGCTCGAAAACAAATGAAAAAAGGGGACTGGTCGT
ATGAAATCTAA

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Tetratricopeptide repeat (TPR_8) (260-290)

• Tetratricopeptide repeat (TPR_12) (190-252)

3D structure

• AlphaFold DB: Q65HV9

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	47.745	100	0.479
rapF	Bacillus subtilis subsp. subtilis str. 168	44.619	100	0.452