Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   FQB22_RS17480 Genome accession   NZ_CP042252
Coordinates   3406567..3407832 (+) Length   421 a.a.
NCBI ID   WP_085959892.1    Uniprot ID   -
Organism   Bacillus licheniformis strain KNU11     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 3401567..3412832
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FQB22_RS17455 pyrH 3402353..3403075 (+) 723 WP_009328506.1 UMP kinase -
  FQB22_RS17460 frr 3403092..3403634 (+) 543 WP_202604249.1 ribosome recycling factor -
  FQB22_RS17465 - 3403764..3404546 (+) 783 WP_003181841.1 isoprenyl transferase -
  FQB22_RS17470 - 3404559..3405362 (+) 804 WP_016885472.1 phosphatidate cytidylyltransferase -
  FQB22_RS17475 dxr 3405409..3406560 (+) 1152 WP_003181846.1 1-deoxy-D-xylulose-5-phosphate reductoisomerase -
  FQB22_RS17480 eeP 3406567..3407832 (+) 1266 WP_085959892.1 RIP metalloprotease RseP Regulator
  FQB22_RS17485 - 3407942..3409660 (+) 1719 WP_003181850.1 proline--tRNA ligase -

Sequence

Protein


Download         Length: 421 a.a.        Molecular weight: 46696.53 Da        Isoelectric Point: 5.4856

>NTDB_id=330747 FQB22_RS17480 WP_085959892.1 3406567..3407832(+) (eeP) [Bacillus licheniformis strain KNU11]
MFVNTVIAFILIFGTLVFFHELGHLILAQRAGILCREFAIGFGPKIFSFKKNETVYTIRLLPIGGFVRMAGEDPEMIEVK
PGYTVGLLFDSENKVEKIIINQKEKYPDALVIEVEQADLEHQMRITGYEHGNEDHLSSFSVSETSFFIVDGEEVQIAPYN
RQFHSKTVWQRIKAIAAGPIMNFILAYVILVMLGLMQGVPSDEPVLGKLIDNGRAAEAGLQEGDRIQTINGENMRSWTDI
VNTVREHPEKELKIVLMRDNVKLTKYVTPEAVKAGDETVGRFGAYNPVKTGVLTSISYGATETATVAQSIVTNLGKLVTG
QFSIDMLAGPVGIYDMTDQVAKTGVINLLKLAAFLSINLGIVNLLPIPALDGGRLLFLFIEAIRGKPINREKEAFVVFIG
VAFLMLLMLVVTWNDIQRLFL

Nucleotide


Download         Length: 1266 bp        

>NTDB_id=330747 FQB22_RS17480 WP_085959892.1 3406567..3407832(+) (eeP) [Bacillus licheniformis strain KNU11]
ATGTTCGTGAATACTGTGATCGCGTTTATTCTTATTTTTGGAACGCTCGTATTTTTCCATGAGCTTGGTCATCTCATCCT
TGCTCAAAGAGCCGGAATACTGTGCCGGGAGTTTGCTATCGGCTTCGGTCCGAAAATCTTTTCGTTTAAGAAAAATGAGA
CCGTTTATACGATCAGGCTTCTTCCGATCGGCGGCTTTGTCAGAATGGCCGGCGAAGATCCTGAGATGATTGAAGTGAAG
CCCGGTTATACGGTCGGGCTGTTGTTCGACAGCGAAAACAAGGTCGAAAAGATCATTATCAACCAAAAAGAAAAGTATCC
CGACGCATTGGTCATTGAAGTGGAGCAGGCCGACCTGGAGCACCAGATGAGGATTACGGGCTATGAGCACGGCAATGAAG
ATCATCTCTCTTCATTTTCTGTCAGTGAAACGTCCTTTTTCATCGTAGACGGGGAAGAAGTCCAGATCGCTCCTTACAAC
CGCCAATTTCATTCGAAAACGGTTTGGCAGCGCATCAAAGCGATTGCTGCCGGACCGATCATGAACTTTATTTTGGCTTA
TGTCATACTCGTGATGCTCGGACTGATGCAGGGAGTGCCGTCTGACGAGCCGGTGCTCGGCAAGTTGATAGACAACGGAC
GGGCGGCGGAAGCAGGCCTCCAGGAGGGAGACCGCATTCAAACGATCAACGGGGAGAACATGAGGTCGTGGACGGATATT
GTCAACACGGTCAGAGAACACCCTGAAAAAGAACTGAAAATCGTTTTGATGCGCGACAATGTCAAGCTGACGAAATACGT
AACACCTGAAGCTGTCAAGGCAGGGGATGAAACCGTCGGCAGATTCGGCGCTTACAATCCTGTGAAAACAGGCGTTCTGA
CATCGATTTCCTACGGTGCGACCGAAACGGCGACAGTGGCCCAGAGCATCGTCACCAATCTCGGAAAGCTCGTCACAGGA
CAATTCTCAATCGACATGCTGGCCGGTCCTGTCGGCATTTATGACATGACAGACCAAGTGGCCAAGACAGGCGTTATCAA
CCTGCTGAAGCTGGCCGCATTTTTAAGCATCAACCTCGGGATCGTCAACCTTCTGCCAATCCCTGCGCTGGACGGCGGAA
GACTGTTGTTCCTGTTTATTGAAGCGATCCGCGGGAAGCCGATCAACCGCGAAAAAGAAGCGTTTGTCGTCTTTATCGGC
GTCGCATTTTTGATGCTCCTAATGCTTGTCGTCACATGGAACGATATCCAGCGCTTATTTCTGTAA

Domains

Predicted by InterProScan.

Peptidase family M50 (Peptidase_M50)

(8-407)

PDZ domain (PDZ_6)

(211-258)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

38.928

100

0.397
  eeP Streptococcus thermophilus LMD-9

38.785

100

0.394

Multiple sequence alignment