Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   EI562_RS05130 Genome accession   NZ_CP034336
Coordinates   944088..944714 (-) Length   208 a.a.
NCBI ID   WP_023311030.1    Uniprot ID   A0A1Z3N2L7
Organism   Enterobacter asburiae strain CAV1043     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 939088..949714
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EI562_RS05115 (EI562_05115) helD 939325..941379 (-) 2055 WP_023311033.1 DNA helicase IV -
  EI562_RS05120 (EI562_05120) - 941503..941949 (+) 447 WP_023311032.1 YccF domain-containing protein -
  EI562_RS05125 (EI562_05125) yccS 941969..944131 (+) 2163 WP_023311031.1 YccS family putative transporter -
  EI562_RS05130 (EI562_05130) sxy/tfoX 944088..944714 (-) 627 WP_023311030.1 TfoX/Sxy family DNA transformation protein Regulator
  EI562_RS05135 (EI562_05135) sulA 944932..945441 (+) 510 WP_032668147.1 SOS-induced cell division inhibitor SulA -
  EI562_RS05140 (EI562_05140) ompA 945796..946851 (+) 1056 WP_023311028.1 porin OmpA -
  EI562_RS05145 (EI562_05145) matP 946915..947367 (-) 453 WP_008499929.1 macrodomain Ter protein MatP -
  EI562_RS05150 (EI562_05150) - 947554..949314 (+) 1761 WP_023311027.1 Lon protease family protein -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 23906.46 Da        Isoelectric Point: 9.4588

>NTDB_id=330735 EI562_RS05130 WP_023311030.1 944088..944714(-) (sxy/tfoX) [Enterobacter asburiae strain CAV1043]
MKKISYERIYKSQEYLSPLGEIHHRALFGGYTLAVDDAVFAMVSDGELYLRACEESAKYCVKNASSFLTLMKRGRPVLLN
YYRVDDGLWQDRERLLQLSSFALSAARKERYQRHQRNRLKDLPNLTFQLEVLLFEAGITNEETLRALGARASWLKMRAKN
KALSIKVLFALEGAIEGLHEAALPAGIRRELTEWFNALPEPQENHSSR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=330735 EI562_RS05130 WP_023311030.1 944088..944714(-) (sxy/tfoX) [Enterobacter asburiae strain CAV1043]
ATGAAAAAGATATCTTATGAACGGATTTATAAATCCCAGGAATACCTCTCCCCGTTGGGCGAGATTCATCATCGCGCGCT
GTTTGGAGGCTATACCCTGGCGGTGGATGATGCGGTTTTTGCCATGGTGTCAGACGGAGAGCTTTATCTTCGCGCCTGTG
AGGAGAGTGCGAAATACTGTGTAAAAAATGCCTCCTCTTTTTTAACGTTGATGAAGCGAGGCCGCCCGGTGCTGCTCAAC
TATTATCGTGTGGATGATGGATTATGGCAGGACAGGGAGCGGTTGCTTCAGCTCTCCTCGTTTGCGCTCAGTGCGGCAAG
AAAAGAACGCTATCAGCGCCATCAACGAAACCGACTTAAGGATCTGCCAAACCTGACCTTTCAACTTGAAGTCTTGCTCT
TTGAAGCTGGCATTACCAATGAGGAAACGCTGCGGGCGCTGGGTGCAAGAGCGAGCTGGCTAAAGATGCGGGCAAAAAAC
AAAGCGCTCAGTATTAAAGTTCTCTTCGCGCTGGAAGGGGCTATCGAGGGGCTGCATGAGGCGGCACTCCCGGCAGGCAT
TCGCCGGGAGCTAACGGAGTGGTTTAATGCGCTGCCTGAGCCACAGGAGAATCACTCCTCCAGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(116-194)

TfoX N-terminal domain (TfoX_N)

(14-106)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1Z3N2L7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.128

97.596

0.567

Multiple sequence alignment