Detailed information NTG0330710

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: FQB22_RS13575
• Genome accession: NZ_CP042252
• Coordinates: 2672667..2673785 (+)
• Length: 372 a.a.
• NCBI ID: WP_009328956.1
• Uniprot ID: -
• Organism: Bacillus licheniformis strain KNU11
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 2667667..2678785

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FQB22_RS13550	-	2667869..2669374 (+)	1506	WP_020450779.1	coproporphyrinogen III oxidase	-
FQB22_RS13555	-	2669454..2670665 (-)	1212	WP_016886432.1	cation:proton antiporter	-
FQB22_RS13560	-	2670672..2671169 (-)	498	WP_003180220.1	cation:proton antiporter regulatory subunit	-
FQB22_RS13565	-	2671234..2671563 (-)	330	WP_016886161.1	hypothetical protein	-
FQB22_RS13570	-	2671764..2672540 (+)	777	WP_011197707.1	enoyl-CoA hydratase	-
FQB22_RS13575	rapC	2672667..2673785 (+)	1119	WP_009328956.1	Rap family tetratricopeptide repeat protein	Regulator
FQB22_RS21925	-	2673775..2673912 (+)	138	WP_016886158.1	hypothetical protein	-
FQB22_RS13580	-	2673917..2674195 (+)	279	WP_003180226.1	hypothetical protein	-
FQB22_RS13585	-	2674270..2674455 (-)	186	WP_003180228.1	YhzD family protein	-
FQB22_RS13590	-	2674573..2675469 (+)	897	WP_003180230.1	ABC transporter ATP-binding protein	-
FQB22_RS13595	-	2675462..2676730 (+)	1269	WP_003180232.1	ABC transporter permease	-
FQB22_RS13600	-	2676850..2678076 (+)	1227	WP_009328954.1	metallophosphoesterase family protein	-

Sequence

Protein

• Length: 372 a.a.
• Molecular weight: 43356.03 Da
• Isoelectric Point: 5.5287

>NTDB_id=330710 FQB22_RS13575 WP_009328956.1 2672667..2673785(+) (rapC) [Bacillus licheniformis strain KNU11]
MKQKIPSEYVARKLNDWYNAIRKNQIAASESLKAEILNDFQDMEENQDVLLYYSLLEFRHKLMLSYLKPKETENIEKNLR
DLEEKEDQMTGLLNYYYWFFKGMYEFKQKRFVKAIGCYKTAEQKVSALEDEVEKAEFYYKLAEIYYYINQRYLSINYATL
ASDIFNRYETLKEKKIFCDFIIAGNWVESMTYGPALKSLANALEDARKIKNSHLTAAAHFNLGNCYFHQESYREASDHME
SALSIFEQESSSYIPKVLYNLMYVRLKQGNHAGAAACYEKGIRSAASLGDEEHAAKLNILCGLYLDGGDQKAVENGFDYL
ESNHLYAAVEELALDAAQYYNQIERLKDSIFYYEKCAQASRKIKRGDALYES

Nucleotide

• Length: 1119 bp

>NTDB_id=330710 FQB22_RS13575 WP_009328956.1 2672667..2673785(+) (rapC) [Bacillus licheniformis strain KNU11]
TTGAAACAGAAGATTCCATCTGAATACGTTGCTAGAAAGCTGAATGATTGGTACAACGCCATTCGGAAAAATCAGATCGC
CGCCAGTGAATCATTGAAAGCGGAAATTTTAAATGATTTTCAAGACATGGAAGAAAATCAGGACGTCCTGCTCTACTATT
CGCTGCTTGAATTCAGGCATAAACTGATGCTCAGCTATTTGAAACCGAAAGAGACTGAAAATATTGAAAAAAACCTCCGC
GACTTAGAAGAAAAAGAAGACCAAATGACGGGTTTATTAAACTATTATTACTGGTTTTTTAAAGGGATGTATGAGTTCAA
ACAAAAGCGGTTCGTCAAAGCAATCGGCTGCTATAAAACGGCTGAACAAAAAGTCAGCGCACTGGAAGACGAGGTTGAAA
AAGCGGAATTTTATTATAAGCTTGCGGAAATCTACTATTATATCAACCAGAGATACCTGTCGATCAACTATGCGACGCTA
GCTTCCGACATTTTTAACCGGTATGAAACGCTAAAAGAAAAAAAGATTTTCTGCGATTTTATCATTGCCGGTAATTGGGT
TGAATCGATGACATACGGACCCGCGCTGAAAAGCCTGGCCAATGCGCTTGAAGACGCCAGGAAAATCAAAAACAGCCATT
TGACGGCAGCCGCTCATTTTAATTTGGGAAATTGCTATTTCCACCAAGAATCGTACCGGGAAGCCTCAGATCATATGGAG
AGCGCCCTTTCCATTTTTGAACAGGAAAGTTCATCATATATTCCCAAAGTGCTGTACAACTTGATGTACGTCCGTCTCAA
GCAGGGGAACCATGCCGGAGCTGCCGCCTGTTATGAAAAAGGCATCCGAAGCGCGGCATCGCTCGGGGATGAAGAACACG
CGGCAAAGCTTAACATTCTGTGCGGGCTGTATTTAGACGGAGGGGATCAGAAAGCCGTGGAAAACGGATTTGATTATTTG
GAGTCAAATCATTTATATGCTGCTGTTGAAGAGCTGGCTTTAGATGCAGCCCAGTATTATAATCAAATTGAGCGGCTGAA
AGATTCCATTTTTTACTATGAAAAGTGCGCTCAGGCAAGTCGAAAAATCAAAAGGGGAGATGCGTTGTATGAAAGCTAA

Domains

Predicted by InterProScan.

• Tetratricopeptide repeat (TPR_12) (195-248)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-64)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	37.166	100	0.374