Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiE   Type   Regulator
Locus tag   FQB22_RS00455 Genome accession   NZ_CP042252
Coordinates   75990..76808 (+) Length   272 a.a.
NCBI ID   WP_003183804.1    Uniprot ID   Q65GX9
Organism   Bacillus licheniformis strain KNU11     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 70990..81808
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FQB22_RS00435 - 71229..72278 (-) 1050 WP_003183797.1 NAD(P)/FAD-dependent oxidoreductase -
  FQB22_RS00440 nikA 72568..74190 (+) 1623 WP_003183798.1 nickel ABC transporter substrate-binding protein -
  FQB22_RS00445 nikB 74200..75144 (+) 945 WP_003183800.1 nickel ABC transporter permease subunit NikB -
  FQB22_RS00450 nikC 75141..75974 (+) 834 WP_003183802.1 nickel ABC transporter permease subunit NikC -
  FQB22_RS00455 amiE 75990..76808 (+) 819 WP_003183804.1 nickel import ATP-binding protein NikD Regulator
  FQB22_RS00460 nikE 76850..77668 (+) 819 WP_025805007.1 nickel import ATP-binding protein NikE -
  FQB22_RS00465 - 77981..78817 (+) 837 WP_003183808.1 MerR family transcriptional regulator -
  FQB22_RS00470 - 78874..80229 (+) 1356 WP_016885506.1 MATE family efflux transporter -
  FQB22_RS00475 - 80543..81550 (+) 1008 Protein_93 helix-turn-helix domain-containing protein -

Sequence

Protein


Download         Length: 272 a.a.        Molecular weight: 30149.90 Da        Isoelectric Point: 8.4839

>NTDB_id=330639 FQB22_RS00455 WP_003183804.1 75990..76808(+) (amiE) [Bacillus licheniformis strain KNU11]
MGTEQSTVLRVRDLHVQVNNQKGHSTLVQDINFDLKRGQVLGLIGESGCGKTVTSMSILQTLDPKTTKVEGSIALRGREL
NGLADKEMRKIRGKDIAYIMQNPMNAFTPVFTIGQQMTESIRSHTSFSKKQAKELATEALHHVNLPHPAKLLHSYPFQLS
GGMLQRVMIAIASCLKPAILIADEPTTALDVYNQKTVLKYLDGMRSDFGTAILLISHDLGVIAEMADEVAVMQNGRIVEN
RDVFQLFDEPKHEYTKKLLSARLTLPVDQLAT

Nucleotide


Download         Length: 819 bp        

>NTDB_id=330639 FQB22_RS00455 WP_003183804.1 75990..76808(+) (amiE) [Bacillus licheniformis strain KNU11]
TTGGGAACAGAACAATCAACGGTGCTTCGAGTCAGAGATTTGCATGTACAGGTTAACAACCAAAAAGGACATTCAACCCT
TGTGCAAGACATCAATTTTGATTTGAAGCGCGGCCAAGTCCTTGGTCTGATTGGTGAGAGCGGTTGCGGAAAAACGGTAA
CAAGCATGTCTATTCTTCAGACGCTTGATCCAAAAACAACTAAGGTGGAAGGAAGTATTGCATTGCGAGGCCGTGAATTG
AACGGATTAGCAGATAAGGAAATGCGTAAAATCCGCGGCAAAGATATTGCCTATATCATGCAAAATCCGATGAACGCTTT
TACACCCGTTTTTACGATAGGACAGCAAATGACCGAATCGATTCGCTCTCATACATCTTTTAGCAAGAAACAGGCGAAAG
AGCTTGCGACCGAAGCATTGCATCATGTTAACCTACCCCACCCTGCTAAACTTTTACATTCTTATCCTTTTCAATTAAGC
GGCGGAATGCTTCAACGGGTCATGATTGCAATTGCATCATGCTTAAAGCCTGCCATTCTCATCGCGGATGAGCCTACCAC
TGCGCTCGACGTGTATAATCAGAAGACGGTGCTGAAATATTTAGACGGCATGCGTTCTGACTTCGGCACGGCGATTTTGC
TTATATCTCATGACCTCGGCGTTATTGCTGAAATGGCGGATGAAGTTGCTGTGATGCAGAATGGGAGAATTGTAGAAAAT
AGAGATGTGTTTCAGCTGTTTGATGAACCAAAGCATGAATATACTAAGAAGCTATTAAGTGCACGGTTGACATTGCCGGT
GGATCAACTTGCGACTTGA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(29-186)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q65GX9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiE Streptococcus salivarius strain HSISS4

40.37

99.265

0.401
  oppD Streptococcus mutans UA159

40.385

95.588

0.386
  amiE Streptococcus thermophilus LMG 18311

40.076

96.324

0.386
  amiE Streptococcus thermophilus LMD-9

40.076

96.324

0.386

Multiple sequence alignment