Detailed information
Bioinformatically predicted
Overview
| Name | luxP | Type | Regulator |
| Locus tag | EHC69_RS22710 | Genome accession | NZ_CP034299 |
| Coordinates | 1109100..1110197 (+) | Length | 365 a.a. |
| NCBI ID | WP_005463467.1 | Uniprot ID | Q87GU4 |
| Organism | Vibrio parahaemolyticus strain 20160303005-1 | ||
| Function | autoinducer sensor (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1104100..1115197
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EHC69_RS22675 (EHC69_22925) | - | 1104236..1105213 (+) | 978 | WP_015313433.1 | Gfo/Idh/MocA family protein | - |
| EHC69_RS22680 (EHC69_22930) | - | 1105287..1106624 (-) | 1338 | WP_162814288.1 | MATE family efflux transporter | - |
| EHC69_RS22685 (EHC69_22935) | - | 1106747..1107061 (-) | 315 | WP_005453573.1 | DUF496 family protein | - |
| EHC69_RS22695 (EHC69_22945) | - | 1107389..1107604 (+) | 216 | WP_005477197.1 | hypothetical protein | - |
| EHC69_RS22700 (EHC69_22950) | - | 1107781..1108431 (+) | 651 | WP_017447360.1 | YceH family protein | - |
| EHC69_RS22705 (EHC69_22955) | - | 1108428..1108748 (+) | 321 | WP_005463466.1 | GIY-YIG nuclease family protein | - |
| EHC69_RS22710 (EHC69_22960) | luxP | 1109100..1110197 (+) | 1098 | WP_005463467.1 | autoinducer 2-binding periplasmic protein LuxP | Regulator |
| EHC69_RS22715 (EHC69_22965) | luxQ | 1110197..1112773 (+) | 2577 | WP_114868304.1 | quorum-sensing autoinducer 2 sensor kinase/phosphatase LuxQ | - |
| EHC69_RS22720 (EHC69_22970) | - | 1112985..1113440 (+) | 456 | WP_005463471.1 | MarR family transcriptional regulator | - |
| EHC69_RS22725 (EHC69_22975) | - | 1113478..1114533 (+) | 1056 | WP_015313427.1 | HlyD family secretion protein | - |
Sequence
Protein
Download Length: 365 a.a. Molecular weight: 41339.67 Da Isoelectric Point: 5.0568
>NTDB_id=330561 EHC69_RS22710 WP_005463467.1 1109100..1110197(+) (luxP) [Vibrio parahaemolyticus strain 20160303005-1]
MNKALVLSLISIAGMSPASQASQVLNGYWAYQEFLNEFPEQKHLTDALAAAVRDDPVPIAPEKRHPLKISVVYPGQQISD
YWIRNIDAFEKRLDKLNIDYQINQVFTRPNADIKQQSLSLMEALKSNSDYLIFTLDTTRHRKFVEHVLDSTKTKLILQNI
TTPVREWETRQPFMYVGFDHAEGSRELAVEFGKQFPKNTHYSVLYFSEGYISDIRGNTFIHQVNQDSQFELQSAYYTKAT
KQSGYEAAKASLKKYPDVEFIYACSTDVALGAVEALSELGREDVMINGWGGGSAELDAILKGELDITVMRMNDDTGIAMA
EAIKWDLEGKPVPTVYSGDFEVVTKSDSPERIEALRKRAFRYSDN
MNKALVLSLISIAGMSPASQASQVLNGYWAYQEFLNEFPEQKHLTDALAAAVRDDPVPIAPEKRHPLKISVVYPGQQISD
YWIRNIDAFEKRLDKLNIDYQINQVFTRPNADIKQQSLSLMEALKSNSDYLIFTLDTTRHRKFVEHVLDSTKTKLILQNI
TTPVREWETRQPFMYVGFDHAEGSRELAVEFGKQFPKNTHYSVLYFSEGYISDIRGNTFIHQVNQDSQFELQSAYYTKAT
KQSGYEAAKASLKKYPDVEFIYACSTDVALGAVEALSELGREDVMINGWGGGSAELDAILKGELDITVMRMNDDTGIAMA
EAIKWDLEGKPVPTVYSGDFEVVTKSDSPERIEALRKRAFRYSDN
Nucleotide
Download Length: 1098 bp
>NTDB_id=330561 EHC69_RS22710 WP_005463467.1 1109100..1110197(+) (luxP) [Vibrio parahaemolyticus strain 20160303005-1]
ATGAATAAAGCGTTAGTATTGTCCCTGATTTCAATTGCCGGCATGTCTCCGGCTTCACAAGCCTCTCAGGTTCTTAACGG
CTACTGGGCGTATCAAGAATTCTTAAATGAATTCCCAGAACAGAAACACTTAACGGATGCTCTGGCTGCGGCCGTGAGAG
ACGATCCTGTGCCTATTGCCCCTGAAAAAAGACACCCATTAAAAATCTCCGTTGTTTATCCAGGGCAGCAGATTTCCGAT
TACTGGATAAGAAACATCGACGCGTTTGAGAAGCGCTTAGATAAACTCAATATTGATTACCAAATCAATCAAGTGTTTAC
GCGACCAAACGCCGATATCAAACAACAAAGCCTTTCTTTGATGGAAGCACTGAAAAGCAATTCCGACTACTTAATTTTTA
CACTCGATACGACCCGACATCGTAAGTTTGTCGAACACGTTTTAGATTCCACCAAAACCAAACTTATCCTGCAAAATATC
ACGACGCCAGTCCGTGAATGGGAAACTCGACAGCCTTTTATGTACGTCGGTTTCGATCACGCTGAAGGCAGTCGCGAACT
CGCTGTGGAGTTTGGCAAGCAGTTCCCGAAAAATACCCATTACAGCGTTTTGTACTTCTCTGAAGGCTACATTAGCGATA
TCCGTGGTAACACATTCATTCACCAAGTGAACCAAGACAGTCAGTTTGAACTACAATCTGCTTACTATACAAAAGCGACA
AAACAGTCCGGGTATGAAGCTGCAAAAGCCAGCTTGAAAAAATACCCAGATGTGGAGTTCATTTATGCTTGTTCTACCGA
CGTTGCGTTAGGTGCCGTCGAAGCACTGTCTGAACTTGGCCGCGAAGACGTTATGATCAATGGCTGGGGCGGTGGTTCTG
CTGAGCTAGACGCTATCTTAAAAGGGGAGTTAGATATCACCGTCATGCGTATGAATGATGATACTGGCATTGCTATGGCA
GAGGCGATCAAATGGGATTTGGAAGGTAAGCCTGTACCAACGGTGTACTCTGGGGACTTCGAAGTTGTGACCAAATCAGA
TTCCCCTGAGCGAATTGAAGCTCTCAGAAAACGTGCATTTAGATACTCAGACAATTGA
ATGAATAAAGCGTTAGTATTGTCCCTGATTTCAATTGCCGGCATGTCTCCGGCTTCACAAGCCTCTCAGGTTCTTAACGG
CTACTGGGCGTATCAAGAATTCTTAAATGAATTCCCAGAACAGAAACACTTAACGGATGCTCTGGCTGCGGCCGTGAGAG
ACGATCCTGTGCCTATTGCCCCTGAAAAAAGACACCCATTAAAAATCTCCGTTGTTTATCCAGGGCAGCAGATTTCCGAT
TACTGGATAAGAAACATCGACGCGTTTGAGAAGCGCTTAGATAAACTCAATATTGATTACCAAATCAATCAAGTGTTTAC
GCGACCAAACGCCGATATCAAACAACAAAGCCTTTCTTTGATGGAAGCACTGAAAAGCAATTCCGACTACTTAATTTTTA
CACTCGATACGACCCGACATCGTAAGTTTGTCGAACACGTTTTAGATTCCACCAAAACCAAACTTATCCTGCAAAATATC
ACGACGCCAGTCCGTGAATGGGAAACTCGACAGCCTTTTATGTACGTCGGTTTCGATCACGCTGAAGGCAGTCGCGAACT
CGCTGTGGAGTTTGGCAAGCAGTTCCCGAAAAATACCCATTACAGCGTTTTGTACTTCTCTGAAGGCTACATTAGCGATA
TCCGTGGTAACACATTCATTCACCAAGTGAACCAAGACAGTCAGTTTGAACTACAATCTGCTTACTATACAAAAGCGACA
AAACAGTCCGGGTATGAAGCTGCAAAAGCCAGCTTGAAAAAATACCCAGATGTGGAGTTCATTTATGCTTGTTCTACCGA
CGTTGCGTTAGGTGCCGTCGAAGCACTGTCTGAACTTGGCCGCGAAGACGTTATGATCAATGGCTGGGGCGGTGGTTCTG
CTGAGCTAGACGCTATCTTAAAAGGGGAGTTAGATATCACCGTCATGCGTATGAATGATGATACTGGCATTGCTATGGCA
GAGGCGATCAAATGGGATTTGGAAGGTAAGCCTGTACCAACGGTGTACTCTGGGGACTTCGAAGTTGTGACCAAATCAGA
TTCCCCTGAGCGAATTGAAGCTCTCAGAAAACGTGCATTTAGATACTCAGACAATTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| luxP | Vibrio cholerae strain A1552 |
64.56 |
99.726 |
0.644 |