Detailed information NTG0330519

Bioinformatically predicted

Overview

• Name: luxP
• Type: Regulator
• Locus tag: EHC66_RS24875
• Genome accession: NZ_CP034295
• Coordinates: 1735927..1737024 (-)
• Length: 365 a.a.
• NCBI ID: WP_005463467.1
• Uniprot ID: Q87GU4
• Organism: Vibrio parahaemolyticus strain 20140829008-1
• Function: autoinducer sensor (predicted from homology) Competence regulation

Genomic Context

Location: 1730927..1742024

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EHC66_RS24860 (EHC66_25150)	-	1731591..1732646 (-)	1056	WP_029824929.1	HlyD family secretion protein	-
EHC66_RS24865 (EHC66_25155)	-	1732684..1733139 (-)	456	WP_193237436.1	MarR family transcriptional regulator	-
EHC66_RS24870 (EHC66_25160)	luxQ	1733351..1735927 (-)	2577	WP_159408179.1	quorum-sensing autoinducer 2 sensor kinase/phosphatase LuxQ	-
EHC66_RS24875 (EHC66_25165)	luxP	1735927..1737024 (-)	1098	WP_005463467.1	autoinducer 2-binding periplasmic protein LuxP	Regulator
EHC66_RS24880 (EHC66_25170)	-	1737376..1737696 (-)	321	WP_140103889.1	GIY-YIG nuclease family protein	-
EHC66_RS24885 (EHC66_25175)	-	1737693..1738343 (-)	651	WP_159404373.1	YceH family protein	-
EHC66_RS24890 (EHC66_25180)	-	1738520..1738735 (-)	216	WP_005477197.1	hypothetical protein	-
EHC66_RS24900 (EHC66_25190)	-	1739062..1739376 (+)	315	WP_005453573.1	DUF496 family protein	-
EHC66_RS24905 (EHC66_25195)	-	1739499..1740835 (+)	1337	Protein_1563	MATE family efflux transporter	-
EHC66_RS24910 (EHC66_25200)	-	1740909..1741886 (-)	978	WP_140103890.1	Gfo/Idh/MocA family protein	-

Sequence

Protein

• Length: 365 a.a.
• Molecular weight: 41339.67 Da
• Isoelectric Point: 5.0568

>NTDB_id=330519 EHC66_RS24875 WP_005463467.1 1735927..1737024(-) (luxP) [Vibrio parahaemolyticus strain 20140829008-1]
MNKALVLSLISIAGMSPASQASQVLNGYWAYQEFLNEFPEQKHLTDALAAAVRDDPVPIAPEKRHPLKISVVYPGQQISD
YWIRNIDAFEKRLDKLNIDYQINQVFTRPNADIKQQSLSLMEALKSNSDYLIFTLDTTRHRKFVEHVLDSTKTKLILQNI
TTPVREWETRQPFMYVGFDHAEGSRELAVEFGKQFPKNTHYSVLYFSEGYISDIRGNTFIHQVNQDSQFELQSAYYTKAT
KQSGYEAAKASLKKYPDVEFIYACSTDVALGAVEALSELGREDVMINGWGGGSAELDAILKGELDITVMRMNDDTGIAMA
EAIKWDLEGKPVPTVYSGDFEVVTKSDSPERIEALRKRAFRYSDN

Nucleotide

• Length: 1098 bp

>NTDB_id=330519 EHC66_RS24875 WP_005463467.1 1735927..1737024(-) (luxP) [Vibrio parahaemolyticus strain 20140829008-1]
ATGAATAAAGCGTTAGTATTGTCCCTGATTTCAATTGCCGGCATGTCTCCGGCTTCACAAGCCTCTCAGGTTCTTAACGG
CTACTGGGCGTATCAAGAATTCTTAAATGAATTTCCAGAACAGAAACACTTAACGGATGCTCTGGCTGCGGCCGTGAGAG
ACGATCCTGTACCTATTGCCCCTGAAAAAAGACACCCATTAAAAATCTCCGTTGTTTATCCAGGGCAGCAGATTTCTGAT
TACTGGATAAGAAACATCGACGCGTTTGAGAAGCGCTTAGATAAACTCAATATTGATTACCAAATCAATCAAGTGTTTAC
GCGACCAAACGCCGATATCAAACAACAAAGCCTTTCTTTGATGGAAGCACTGAAAAGCAATTCCGACTACTTAATTTTTA
CACTCGATACGACCCGACATCGTAAGTTTGTCGAACACGTTTTAGATTCCACCAAAACCAAACTTATCCTGCAAAATATC
ACGACGCCAGTCCGTGAATGGGAAACTCGACAGCCTTTTATGTACGTCGGTTTCGATCACGCTGAAGGCAGTCGCGAACT
CGCTGTGGAGTTTGGCAAGCAGTTCCCGAAAAATACCCATTACAGCGTTTTGTACTTCTCTGAAGGCTACATTAGCGATA
TCCGTGGTAACACATTCATTCACCAAGTGAACCAAGACAGTCAGTTTGAACTACAATCTGCTTACTATACAAAAGCGACA
AAACAGTCCGGGTATGAAGCTGCAAAAGCCAGCTTGAAAAAATACCCAGATGTGGAGTTCATTTATGCTTGTTCTACCGA
CGTTGCGTTAGGTGCCGTCGAAGCACTGTCTGAACTTGGCCGTGAAGACGTAATGATTAATGGCTGGGGCGGTGGTTCTG
CTGAGCTAGACGCTATCTTAAAAGGGGAGTTAGATATCACCGTCATGCGTATGAATGATGATACTGGCATTGCGATGGCA
GAGGCGATCAAATGGGATTTGGAAGGTAAGCCTGTACCAACGGTGTACTCTGGGGACTTCGAAGTTGTGACCAAATCAGA
TTCCCCTGAGCGAATTGAAGCTCTCAGAAAACGTGCATTTAGATACTCAGATAATTGA

Domains

Predicted by InterProScan.

• Periplasmic binding protein domain (Peripla_BP_4) (69-324)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
luxP	Vibrio cholerae strain A1552	64.56	99.726	0.644