Detailed information NTG0330475

Bioinformatically predicted

Overview

• Name: luxP
• Type: Regulator
• Locus tag: EHC64_RS25220
• Genome accession: NZ_CP034290
• Coordinates: 1724965..1726062 (-)
• Length: 365 a.a.
• NCBI ID: WP_005463467.1
• Uniprot ID: Q87GU4
• Organism: Vibrio parahaemolyticus strain 20140722001-1
• Function: autoinducer sensor (predicted from homology) Competence regulation

Genomic Context

Location: 1719965..1731062

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EHC64_RS25205 (EHC64_25515)	-	1720629..1721684 (-)	1056	WP_029824929.1	HlyD family secretion protein	-
EHC64_RS25210 (EHC64_25520)	-	1721722..1722177 (-)	456	WP_193237436.1	MarR family transcriptional regulator	-
EHC64_RS25215 (EHC64_25525)	luxQ	1722389..1724965 (-)	2577	WP_159408179.1	quorum-sensing autoinducer 2 sensor kinase/phosphatase LuxQ	-
EHC64_RS25220 (EHC64_25530)	luxP	1724965..1726062 (-)	1098	WP_005463467.1	autoinducer 2-binding periplasmic protein LuxP	Regulator
EHC64_RS25225 (EHC64_25535)	-	1726414..1726734 (-)	321	WP_140103889.1	GIY-YIG nuclease family protein	-
EHC64_RS25230 (EHC64_25540)	-	1726731..1727381 (-)	651	WP_159404373.1	YceH family protein	-
EHC64_RS25235 (EHC64_25545)	-	1727558..1727773 (-)	216	WP_005477197.1	hypothetical protein	-
EHC64_RS25245 (EHC64_25555)	-	1728100..1728414 (+)	315	WP_005453573.1	DUF496 family protein	-
EHC64_RS25250 (EHC64_25560)	-	1728537..1729873 (+)	1337	Protein_1551	MATE family efflux transporter	-
EHC64_RS25255 (EHC64_25565)	-	1729947..1730924 (-)	978	WP_140103890.1	Gfo/Idh/MocA family protein	-

Sequence

Protein

• Length: 365 a.a.
• Molecular weight: 41339.67 Da
• Isoelectric Point: 5.0568

>NTDB_id=330475 EHC64_RS25220 WP_005463467.1 1724965..1726062(-) (luxP) [Vibrio parahaemolyticus strain 20140722001-1]
MNKALVLSLISIAGMSPASQASQVLNGYWAYQEFLNEFPEQKHLTDALAAAVRDDPVPIAPEKRHPLKISVVYPGQQISD
YWIRNIDAFEKRLDKLNIDYQINQVFTRPNADIKQQSLSLMEALKSNSDYLIFTLDTTRHRKFVEHVLDSTKTKLILQNI
TTPVREWETRQPFMYVGFDHAEGSRELAVEFGKQFPKNTHYSVLYFSEGYISDIRGNTFIHQVNQDSQFELQSAYYTKAT
KQSGYEAAKASLKKYPDVEFIYACSTDVALGAVEALSELGREDVMINGWGGGSAELDAILKGELDITVMRMNDDTGIAMA
EAIKWDLEGKPVPTVYSGDFEVVTKSDSPERIEALRKRAFRYSDN

Nucleotide

• Length: 1098 bp

>NTDB_id=330475 EHC64_RS25220 WP_005463467.1 1724965..1726062(-) (luxP) [Vibrio parahaemolyticus strain 20140722001-1]
ATGAATAAAGCGTTAGTATTGTCCCTGATTTCAATTGCCGGCATGTCTCCGGCTTCACAAGCCTCTCAGGTTCTTAACGG
CTACTGGGCGTATCAAGAATTCTTAAATGAATTTCCAGAACAGAAACACTTAACGGATGCTCTGGCTGCGGCCGTGAGAG
ACGATCCTGTACCTATTGCCCCTGAAAAAAGACACCCATTAAAAATCTCCGTTGTTTATCCAGGGCAGCAGATTTCTGAT
TACTGGATAAGAAACATCGACGCGTTTGAGAAGCGCTTAGATAAACTCAATATTGATTACCAAATCAATCAAGTGTTTAC
GCGACCAAACGCCGATATCAAACAACAAAGCCTTTCTTTGATGGAAGCACTGAAAAGCAATTCCGACTACTTAATTTTTA
CACTCGATACGACCCGACATCGTAAGTTTGTCGAACACGTTTTAGATTCCACCAAAACCAAACTTATCCTGCAAAATATC
ACGACGCCAGTCCGTGAATGGGAAACTCGACAGCCTTTTATGTACGTCGGTTTCGATCACGCTGAAGGCAGTCGCGAACT
CGCTGTGGAGTTTGGCAAGCAGTTCCCGAAAAATACCCATTACAGCGTTTTGTACTTCTCTGAAGGCTACATTAGCGATA
TCCGTGGTAACACATTCATTCACCAAGTGAACCAAGACAGTCAGTTTGAACTACAATCTGCTTACTATACAAAAGCGACA
AAACAGTCCGGGTATGAAGCTGCAAAAGCCAGCTTGAAAAAATACCCAGATGTGGAGTTCATTTATGCTTGTTCTACCGA
CGTTGCGTTAGGTGCCGTCGAAGCACTGTCTGAACTTGGCCGTGAAGACGTAATGATTAATGGCTGGGGCGGTGGTTCTG
CTGAGCTAGACGCTATCTTAAAAGGGGAGTTAGATATCACCGTCATGCGTATGAATGATGATACTGGCATTGCGATGGCA
GAGGCGATCAAATGGGATTTGGAAGGTAAGCCTGTACCAACGGTGTACTCTGGGGACTTCGAAGTTGTGACCAAATCAGA
TTCCCCTGAGCGAATTGAAGCTCTCAGAAAACGTGCATTTAGATACTCAGATAATTGA

Domains

Predicted by InterproScan.

• Periplasmic binding protein domain (Peripla_BP_4) (69-324)

3D structure

• AlphaFold DB: Q87GU4

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
luxP	Vibrio cholerae strain A1552	64.56	99.726	0.644