Detailed information NTG0330431

Bioinformatically predicted

Overview

• Name: luxP
• Type: Regulator
• Locus tag: EHC70_RS24165
• Genome accession: NZ_CP034286
• Coordinates: 1627156..1628253 (-)
• Length: 365 a.a.
• NCBI ID: WP_005463467.1
• Uniprot ID: Q87GU4
• Organism: Vibrio parahaemolyticus strain 20140624012-1
• Function: autoinducer sensor (predicted from homology) Competence regulation

Genomic Context

Location: 1622156..1633253

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EHC70_RS24150 (EHC70_24435)	-	1622820..1623875 (-)	1056	WP_029824929.1	HlyD family secretion protein	-
EHC70_RS24155 (EHC70_24440)	-	1623913..1624368 (-)	456	WP_193237436.1	MarR family transcriptional regulator	-
EHC70_RS24160 (EHC70_24445)	luxQ	1624580..1627156 (-)	2577	WP_005477121.1	quorum-sensing autoinducer 2 sensor kinase/phosphatase LuxQ	-
EHC70_RS24165 (EHC70_24450)	luxP	1627156..1628253 (-)	1098	WP_005463467.1	autoinducer 2-binding periplasmic protein LuxP	Regulator
EHC70_RS24170 (EHC70_24455)	-	1628605..1628925 (-)	321	WP_140103889.1	GIY-YIG nuclease family protein	-
EHC70_RS24175 (EHC70_24460)	-	1628922..1629572 (-)	651	WP_159404373.1	YceH family protein	-
EHC70_RS24180 (EHC70_24465)	-	1629749..1629964 (-)	216	WP_005477197.1	hypothetical protein	-
EHC70_RS24190 (EHC70_24475)	-	1630291..1630605 (+)	315	WP_005453573.1	DUF496 family protein	-
EHC70_RS24195 (EHC70_24480)	-	1630728..1632064 (+)	1337	Protein_1455	MATE family efflux transporter	-
EHC70_RS24200 (EHC70_24485)	-	1632138..1633115 (-)	978	WP_140103890.1	Gfo/Idh/MocA family protein	-

Sequence

Protein

• Length: 365 a.a.
• Molecular weight: 41339.67 Da
• Isoelectric Point: 5.0568

>NTDB_id=330431 EHC70_RS24165 WP_005463467.1 1627156..1628253(-) (luxP) [Vibrio parahaemolyticus strain 20140624012-1]
MNKALVLSLISIAGMSPASQASQVLNGYWAYQEFLNEFPEQKHLTDALAAAVRDDPVPIAPEKRHPLKISVVYPGQQISD
YWIRNIDAFEKRLDKLNIDYQINQVFTRPNADIKQQSLSLMEALKSNSDYLIFTLDTTRHRKFVEHVLDSTKTKLILQNI
TTPVREWETRQPFMYVGFDHAEGSRELAVEFGKQFPKNTHYSVLYFSEGYISDIRGNTFIHQVNQDSQFELQSAYYTKAT
KQSGYEAAKASLKKYPDVEFIYACSTDVALGAVEALSELGREDVMINGWGGGSAELDAILKGELDITVMRMNDDTGIAMA
EAIKWDLEGKPVPTVYSGDFEVVTKSDSPERIEALRKRAFRYSDN

Nucleotide

• Length: 1098 bp

>NTDB_id=330431 EHC70_RS24165 WP_005463467.1 1627156..1628253(-) (luxP) [Vibrio parahaemolyticus strain 20140624012-1]
ATGAATAAAGCGTTAGTATTGTCCCTGATTTCAATTGCCGGCATGTCTCCGGCTTCACAAGCCTCTCAGGTTCTTAACGG
CTACTGGGCGTATCAAGAATTCTTAAATGAATTTCCAGAACAGAAACACTTAACGGATGCTCTGGCTGCGGCCGTGAGAG
ACGATCCTGTACCTATTGCCCCTGAAAAAAGACACCCATTAAAAATCTCCGTTGTTTATCCAGGGCAGCAGATTTCTGAT
TACTGGATAAGAAACATCGACGCGTTTGAGAAGCGCTTAGATAAACTCAATATTGATTACCAAATCAATCAAGTGTTTAC
GCGACCAAACGCCGATATCAAACAACAAAGCCTTTCTTTGATGGAAGCACTGAAAAGCAATTCCGACTACTTAATTTTTA
CACTCGATACGACCCGACATCGTAAGTTTGTCGAACACGTTTTAGATTCCACCAAAACCAAACTTATCCTGCAAAATATC
ACGACGCCAGTCCGTGAATGGGAAACTCGACAGCCTTTTATGTACGTCGGTTTCGATCACGCTGAAGGCAGTCGCGAACT
CGCTGTGGAGTTTGGCAAGCAGTTCCCGAAAAATACCCATTACAGCGTTTTGTACTTCTCTGAAGGCTACATTAGCGATA
TCCGTGGTAACACATTCATTCACCAAGTGAACCAAGACAGTCAGTTTGAACTACAATCTGCTTACTATACAAAAGCGACA
AAACAGTCCGGGTATGAAGCTGCAAAAGCCAGCTTGAAAAAATACCCAGATGTGGAGTTCATTTATGCTTGTTCTACCGA
CGTTGCGTTAGGTGCCGTCGAAGCACTGTCTGAACTTGGCCGTGAAGACGTAATGATTAATGGCTGGGGCGGTGGTTCTG
CTGAGCTAGACGCTATCTTAAAAGGGGAGTTAGATATCACCGTCATGCGTATGAATGATGATACTGGCATTGCGATGGCA
GAGGCGATCAAATGGGATTTGGAAGGTAAGCCTGTACCAACGGTGTACTCTGGGGACTTCGAAGTTGTGACCAAATCAGA
TTCCCCTGAGCGAATTGAAGCTCTCAGAAAACGTGCATTTAGATACTCAGATAATTGA

Domains

Predicted by InterproScan.

• Periplasmic binding protein domain (Peripla_BP_4) (69-324)

3D structure

• AlphaFold DB: Q87GU4

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
luxP	Vibrio cholerae strain A1552	64.56	99.726	0.644