Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   FP481_RS11250 Genome accession   NZ_CP042157
Coordinates   2193243..2193866 (-) Length   207 a.a.
NCBI ID   WP_001208755.1    Uniprot ID   P65819
Organism   Staphylococcus aureus strain B3-17D     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2188243..2198866
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FP481_RS11225 (FP481_11225) rpmG 2189819..2189968 (+) 150 WP_001265708.1 50S ribosomal protein L33 -
  FP481_RS11230 (FP481_11230) rpsN 2190422..2190691 (+) 270 WP_001085655.1 30S ribosomal protein S14 -
  FP481_RS11235 (FP481_11235) guaC 2190848..2191825 (+) 978 WP_000688122.1 GMP reductase -
  FP481_RS11245 (FP481_11245) - 2191847..2192863 (+) 1017 WP_170172420.1 CAP domain-containing protein -
  FP481_RS11250 (FP481_11250) dinR/lexA 2193243..2193866 (-) 624 WP_001208755.1 transcriptional repressor LexA Regulator
  FP481_RS11255 (FP481_11255) sosA 2194009..2194242 (+) 234 WP_000499650.1 DNA damage-induced cell division inhibitor SosA -
  FP481_RS11260 (FP481_11260) - 2194379..2194618 (+) 240 WP_114306635.1 DUF896 domain-containing protein -
  FP481_RS11265 (FP481_11265) recP/tkt 2194739..2196727 (+) 1989 WP_000481443.1 transketolase Machinery gene
  FP481_RS11270 (FP481_11270) - 2197005..2197247 (+) 243 WP_000246909.1 YneF family protein -
  FP481_RS11275 (FP481_11275) - 2197234..2197332 (+) 99 WP_001789897.1 hypothetical protein -
  FP481_RS11280 (FP481_11280) - 2197426..2197893 (+) 468 WP_000966140.1 CcdC family protein -

Sequence

Protein


Download         Length: 207 a.a.        Molecular weight: 23331.55 Da        Isoelectric Point: 4.8811

>NTDB_id=330388 FP481_RS11250 WP_001208755.1 2193243..2193866(-) (dinR/lexA) [Staphylococcus aureus strain B3-17D]
MRELTKRQSEIYNYIKQVVQMKGYPPSVREIGEAVGLASSSTVHGHLSRLEEKGYIRRDPTKPRAIEIVSDQTNDNINME
ETIHVPVIGKVTAGVPITAVENIEEYFPLPEHLTSTHNSDIFILNVVGDSMIEAGILDGDKVIVRSQTIAENGDIIVAMT
EEDEATVKRFYKEKNRYRLQPENSTMEPIYLDNVAVIGKVIGLYREM

Nucleotide


Download         Length: 624 bp        

>NTDB_id=330388 FP481_RS11250 WP_001208755.1 2193243..2193866(-) (dinR/lexA) [Staphylococcus aureus strain B3-17D]
ATGAGAGAATTAACAAAACGACAAAGCGAAATATATAACTATATTAAACAAGTTGTTCAAATGAAAGGTTATCCGCCTAG
TGTTCGCGAAATTGGTGAAGCAGTTGGCTTAGCATCCAGTTCAACTGTTCATGGTCATCTTTCACGTCTTGAAGAAAAAG
GATATATAAGAAGAGATCCAACGAAACCACGTGCTATAGAAATTGTAAGTGATCAAACAAATGATAATATTAATATGGAA
GAAACGATTCATGTGCCAGTTATTGGTAAAGTCACAGCAGGTGTTCCTATTACCGCTGTAGAAAATATTGAAGAGTATTT
TCCATTACCTGAACACTTAACATCGACACATAATAGCGACATATTCATATTAAACGTCGTAGGCGACAGTATGATTGAGG
CTGGTATATTAGACGGAGACAAAGTAATTGTTCGCAGTCAAACCATAGCAGAAAATGGAGACATTATTGTTGCTATGACT
GAGGAAGATGAAGCAACTGTCAAACGCTTCTATAAAGAAAAAAATCGTTATCGATTACAACCTGAAAATAGTACAATGGA
GCCAATTTACCTCGACAATGTTGCTGTAATTGGGAAAGTAATTGGTTTGTACCGCGAAATGTAA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(1-65)

Peptidase S24-like (Peptidase_S24)

(86-201)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P65819

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

66.341

99.034

0.657