Detailed information    

insolico Bioinformatically predicted

Overview


Name   braR   Type   Regulator
Locus tag   FP484_RS06145 Genome accession   NZ_CP042107
Coordinates   1239377..1240051 (+) Length   224 a.a.
NCBI ID   WP_001166500.1    Uniprot ID   Q99VW2
Organism   Staphylococcus aureus strain B8-13D     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 1234377..1245051
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FP484_RS06120 (FP484_06120) - 1234592..1235659 (+) 1068 WP_000980137.1 membrane protein -
  FP484_RS06125 (FP484_06125) - 1235810..1236853 (+) 1044 WP_145391275.1 alpha/beta hydrolase -
  FP484_RS06130 (FP484_06130) - 1237182..1237610 (+) 429 WP_000198504.1 hypothetical protein -
  FP484_RS06135 (FP484_06135) - 1237819..1238325 (-) 507 WP_000940129.1 GNAT family N-acetyltransferase -
  FP484_RS06140 (FP484_06140) graX 1238438..1239361 (+) 924 WP_000802955.1 auxiliary protein GraX/ApsX -
  FP484_RS06145 (FP484_06145) braR 1239377..1240051 (+) 675 WP_001166500.1 response regulator transcription factor GraR/ApsR Regulator
  FP484_RS06150 (FP484_06150) graS 1240044..1241084 (+) 1041 WP_001061264.1 histidine kinase GraS/ApsS -
  FP484_RS06155 (FP484_06155) vraF 1241228..1241989 (+) 762 WP_000985996.1 ABC transporter ATP-binding protein VraF -
  FP484_RS06160 (FP484_06160) vraG 1241979..1243868 (+) 1890 WP_000143610.1 ABC transporter permease VraG -

Sequence


Protein


Download         Length: 224 a.a.        Molecular weight: 26065.87 Da        Isoelectric Point: 4.3563

>NTDB_id=330174 FP484_RS06145 WP_001166500.1 1239377..1240051(+) (braR) [Staphylococcus aureus strain B8-13D]
MQILLVEDDNTLFQELKKELEQWDFNVAGIEDFGKVMDTFESFNPEIVILDVQLPKYDGFYWCRKMREVSNVPILFLSSR
DNPMDQVMSMELGADDYMQKPFYTNVLIAKLQAIYRRVYEFTAEEKRTLTWQDAVVDLSKDSIQKGDDTIFLSKTEMIIL
EILITKKNQIVSRDTIITALWDDEAFVSDNTLTVNVNRLRKKLSEISMDSAIETKVGKGYMAHE

Nucleotide


Download         Length: 675 bp        

>NTDB_id=330174 FP484_RS06145 WP_001166500.1 1239377..1240051(+) (braR) [Staphylococcus aureus strain B8-13D]
ATGCAAATACTACTAGTAGAAGATGACAATACTTTGTTTCAAGAATTGAAAAAAGAATTAGAACAATGGGATTTTAATGT
TGCTGGTATTGAAGATTTCGGCAAAGTAATGGATACATTTGAAAGTTTTAATCCTGAAATTGTTATATTGGATGTTCAAT
TACCTAAATATGATGGGTTTTATTGGTGCAGAAAAATGAGAGAAGTTTCCAACGTACCAATATTATTTTTATCATCTCGT
GATAATCCAATGGATCAAGTGATGAGTATGGAACTTGGCGCAGATGATTATATGCAAAAACCTTTCTATACCAATGTATT
AATTGCTAAATTACAAGCGATTTATCGTCGTGTCTATGAGTTTACAGCTGAAGAAAAACGTACATTGACTTGGCAAGATG
CTGTCGTTGATCTATCAAAAGATAGTATACAAAAAGGTGACGATACGATTTTTCTATCCAAAACAGAAATGATTATATTA
GAAATTCTTATTACCAAAAAAAATCAAATCGTTTCGAGAGATACAATTATCACTGCATTATGGGATGATGAAGCATTTGT
TAGTGATAATACGTTAACAGTAAATGTGAATCGTTTACGAAAAAAATTATCTGAAATTAGTATGGATAGTGCAATCGAAA
CAAAAGTAGGAAAAGGATATATGGCTCATGAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q99VW2

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

40.455

98.214

0.397