Detailed information
Bioinformatically predicted
Overview
| Name | pilY2 | Type | Machinery gene |
| Locus tag | EI070_RS01635 | Genome accession | NZ_CP034243 |
| Coordinates | 347127..347609 (+) | Length | 160 a.a. |
| NCBI ID | WP_001046420.1 | Uniprot ID | A0A7U3Y2Y6 |
| Organism | Acinetobacter baumannii isolate 09A16CRGN003B | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 342127..352609
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EI070_RS01625 (EI070_01625) | pilX | 342430..343248 (+) | 819 | WP_000149374.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
| EI070_RS01630 (EI070_01630) | pilY1 | 343260..347114 (+) | 3855 | WP_000768970.1 | PilC/PilY family type IV pilus protein | Machinery gene |
| EI070_RS01635 (EI070_01635) | pilY2 | 347127..347609 (+) | 483 | WP_001046420.1 | type IV pilin protein | Machinery gene |
| EI070_RS01640 (EI070_01640) | pilE | 347606..348031 (+) | 426 | WP_000788342.1 | type IV pilin protein | Machinery gene |
| EI070_RS01645 (EI070_01645) | rpsP | 348178..348429 (+) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| EI070_RS01650 (EI070_01650) | rimM | 348449..348997 (+) | 549 | WP_000189236.1 | ribosome maturation factor RimM | - |
| EI070_RS01655 (EI070_01655) | trmD | 349043..349783 (+) | 741 | WP_000464598.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| EI070_RS01660 (EI070_01660) | rplS | 349992..350360 (+) | 369 | WP_000014562.1 | 50S ribosomal protein L19 | - |
| EI070_RS01665 (EI070_01665) | - | 350413..351354 (-) | 942 | WP_085916958.1 | triacylglycerol lipase | - |
| EI070_RS01670 (EI070_01670) | - | 351469..352503 (-) | 1035 | WP_001189447.1 | lipase secretion chaperone | - |
Sequence
Protein
Download Length: 160 a.a. Molecular weight: 17548.77 Da Isoelectric Point: 8.4817
>NTDB_id=330141 EI070_RS01635 WP_001046420.1 347127..347609(+) (pilY2) [Acinetobacter baumannii isolate 09A16CRGN003B]
MNKYSILRFNQGVTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAAKSEILKLAEQLEQHKSRNFTYRGFTTTSITLP
RGGYTIQITDDTTTGNLLTNSASNGQTWVIKATTTDSRNFNFIAKNSGLRCQSLTATAVDNDCGGTVTCNVCETNSENWQ
MNKYSILRFNQGVTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAAKSEILKLAEQLEQHKSRNFTYRGFTTTSITLP
RGGYTIQITDDTTTGNLLTNSASNGQTWVIKATTTDSRNFNFIAKNSGLRCQSLTATAVDNDCGGTVTCNVCETNSENWQ
Nucleotide
Download Length: 483 bp
>NTDB_id=330141 EI070_RS01635 WP_001046420.1 347127..347609(+) (pilY2) [Acinetobacter baumannii isolate 09A16CRGN003B]
ATGAATAAGTACTCTATTCTACGGTTCAATCAAGGGGTTACCTTGATTGAGCTTATGGTCGTGATTGTTATCGTTGCTAT
TTTTGCTTCAATTGCTATCCCTTCATATCAAAGTTATAGCCGTAGAGCTACTGCATCTGCGGCTAAAAGTGAAATTTTGA
AATTAGCTGAACAATTAGAACAGCATAAATCAAGAAATTTTACTTATAGGGGTTTTACCACAACCTCTATAACCCTACCT
CGCGGGGGATATACGATTCAAATTACTGATGATACGACCACAGGTAATTTATTAACAAATTCTGCTTCTAATGGTCAAAC
ATGGGTCATTAAAGCGACAACTACAGATTCAAGAAACTTTAATTTTATTGCTAAGAATTCAGGTTTGCGTTGTCAAAGTT
TAACAGCTACGGCTGTTGATAATGACTGTGGTGGAACAGTCACTTGCAATGTATGTGAAACAAATAGTGAGAATTGGCAA
TGA
ATGAATAAGTACTCTATTCTACGGTTCAATCAAGGGGTTACCTTGATTGAGCTTATGGTCGTGATTGTTATCGTTGCTAT
TTTTGCTTCAATTGCTATCCCTTCATATCAAAGTTATAGCCGTAGAGCTACTGCATCTGCGGCTAAAAGTGAAATTTTGA
AATTAGCTGAACAATTAGAACAGCATAAATCAAGAAATTTTACTTATAGGGGTTTTACCACAACCTCTATAACCCTACCT
CGCGGGGGATATACGATTCAAATTACTGATGATACGACCACAGGTAATTTATTAACAAATTCTGCTTCTAATGGTCAAAC
ATGGGTCATTAAAGCGACAACTACAGATTCAAGAAACTTTAATTTTATTGCTAAGAATTCAGGTTTGCGTTGTCAAAGTT
TAACAGCTACGGCTGTTGATAATGACTGTGGTGGAACAGTCACTTGCAATGTATGTGAAACAAATAGTGAGAATTGGCAA
TGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilY2 | Acinetobacter baumannii D1279779 |
97.5 |
100 |
0.975 |
| comE | Acinetobacter baylyi ADP1 |
40.116 |
100 |
0.431 |