Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   FP477_RS04945 Genome accession   NZ_CP042046
Coordinates   940168..940968 (+) Length   266 a.a.
NCBI ID   WP_044033815.1    Uniprot ID   A0A2K4ANM7
Organism   Staphylococcus aureus strain B2-7A     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 935168..945968
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FP477_RS04930 (FP477_04930) walK 935837..937663 (+) 1827 WP_145389801.1 cell wall metabolism sensor histidine kinase WalK -
  FP477_RS04935 (FP477_04935) yycH 937656..938990 (+) 1335 WP_001060140.1 two-component system activity regulator YycH -
  FP477_RS04940 (FP477_04940) - 938991..939779 (+) 789 WP_001104167.1 two-component system regulatory protein YycI -
  FP477_RS04945 (FP477_04945) vicX 940168..940968 (+) 801 WP_044033815.1 MBL fold metallo-hydrolase Regulator
  FP477_RS04950 (FP477_04950) adsA 941196..943514 (+) 2319 WP_145377258.1 LPXTG-anchored adenosine synthase AdsA -
  FP477_RS04960 (FP477_04960) rlmH 943882..944361 (+) 480 WP_000704775.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  FP477_RS04965 (FP477_04965) - 944432..944524 (+) 93 Protein_922 integrase core domain-containing protein -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 30327.54 Da        Isoelectric Point: 6.3392

>NTDB_id=330089 FP477_RS04945 WP_044033815.1 940168..940968(+) (vicX) [Staphylococcus aureus strain B2-7A]
MSRLIRMSVLASGSTGNATFVENEKGSLLVDVGLTGKKMEELFSQIDRNIQDLNGILVTHEHIDHIKGLGVLARKYQLPI
YANEKTWQAIEKKDSRIPMDQKFIFNPYETKSIAGFDVESFNVSHDAIDPQFYIFHNNYKKFTILTDTGYVSDRMKGMIR
GSDAFIFESNHDVDMLRMCRYPWKTKQRILGDMGHVSNEDAGHAMTDVITGNTKRIYLSHLSQDNNMKDLARMSVGQILN
EHDIDTEKEVLLCDTDKAIPTPIYTI

Nucleotide


Download         Length: 801 bp        

>NTDB_id=330089 FP477_RS04945 WP_044033815.1 940168..940968(+) (vicX) [Staphylococcus aureus strain B2-7A]
ATGAGCCGCTTGATACGCATGAGTGTATTAGCAAGTGGTAGTACAGGTAACGCCACTTTTGTAGAAAATGAAAAAGGTAG
TCTATTAGTTGATGTTGGTTTGACTGGCAAGAAAATGGAAGAATTGTTTAGTCAAATTGACCGTAATATTCAAGATTTAA
ATGGTATTTTAGTAACCCATGAACATATTGATCATATTAAAGGATTAGGTGTTTTGGCGCGTAAATATCAATTGCCAATT
TATGCGAATGAAAAGACTTGGCAGGCAATTGAAAAGAAAGATAGTCGCATCCCTATGGATCAGAAATTCATTTTTAATCC
TTATGAAACGAAATCTATTGCAGGTTTCGATGTTGAATCGTTTAACGTGTCACATGATGCGATAGATCCGCAATTTTATA
TTTTCCATAATAACTATAAGAAGTTTACGATTTTAACAGATACGGGTTACGTGTCTGATCGTATGAAAGGTATGATACGT
GGCAGCGATGCGTTTATTTTTGAGAGTAATCATGACGTCGATATGTTGAGAATGTGTCGTTATCCATGGAAGACGAAACA
ACGTATTTTAGGCGATATGGGTCATGTATCTAATGAGGATGCGGGTCATGCGATGACGGATGTGATTACAGGCAACACGA
AACGTATTTACCTATCGCATTTATCACAAGATAATAACATGAAAGATTTGGCACGTATGAGTGTTGGCCAAATATTGAAC
GAACACGATATTGATACGGAAAAAGAAGTATTGCTATGTGATACGGATAAAGCTATTCCAACGCCAATATATACAATATA
A

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(14-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2K4ANM7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

49.027

96.617

0.474

Multiple sequence alignment