Detailed information    

insolico Bioinformatically predicted

Overview

Name   luxS   Type   Regulator
Locus tag   FP477_RS01795 Genome accession   NZ_CP042046
Coordinates   302798..303268 (+) Length   156 a.a.
NCBI ID   WP_145377399.1    Uniprot ID   -
Organism   Staphylococcus aureus strain B2-7A     
Function   induction of competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 297798..308268
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FP477_RS01775 (FP477_01775) coaW 298107..298910 (+) 804 WP_000862736.1 type II pantothenate kinase -
  FP477_RS01780 (FP477_01780) - 299040..299711 (-) 672 WP_000120549.1 DUF2750 domain-containing protein -
  FP477_RS01785 (FP477_01785) - 300110..301303 (-) 1194 WP_000183718.1 hypothetical protein -
  FP477_RS01790 (FP477_01790) - 301303..302487 (-) 1185 WP_001291497.1 M20 family metallopeptidase -
  FP477_RS01795 (FP477_01795) luxS 302798..303268 (+) 471 WP_145377399.1 S-ribosylhomocysteine lyase Regulator
  FP477_RS01800 (FP477_01800) - 303420..303770 (-) 351 WP_001024035.1 membrane protein -
  FP477_RS01805 (FP477_01805) - 303784..305085 (-) 1302 WP_001242318.1 pyrimidine-nucleoside phosphorylase -
  FP477_RS01810 (FP477_01810) deoC 305364..306026 (-) 663 WP_001568284.1 deoxyribose-phosphate aldolase -
  FP477_RS01815 (FP477_01815) deoD 306341..307051 (+) 711 WP_000160304.1 purine-nucleoside phosphorylase -
  FP477_RS01820 (FP477_01820) - 307172..307615 (-) 444 WP_000070866.1 Dps family protein -
  FP477_RS01825 (FP477_01825) - 307815..308228 (-) 414 WP_001123300.1 thiol-disulfide oxidoreductase DCC family protein -

Sequence

Protein


Download         Length: 156 a.a.        Molecular weight: 17495.72 Da        Isoelectric Point: 5.4567

>NTDB_id=330079 FP477_RS01795 WP_145377399.1 302798..303268(+) (luxS) [Staphylococcus aureus strain B2-7A]
MTKMNVESFNLDHTKVVAPFIRLAGTIEGLNGDVIHKYDIRFKQPNKEHMDMPGLHSLEHLMAENIRNHSDKVVDLSPMG
CQTGFYVSFINHDNYDDVLNIVEATLNDVLNATEVPACNEVQCGWAASHSLEGAKTIAQAFLDKRNEWHDVFGTGK

Nucleotide


Download         Length: 471 bp        

>NTDB_id=330079 FP477_RS01795 WP_145377399.1 302798..303268(+) (luxS) [Staphylococcus aureus strain B2-7A]
ATGACAAAAATGAATGTTGAAAGTTTCAATTTAGATCATACTAAGGTGGTTGCCCCATTTATTAGATTAGCGGGAACGAT
AGAAGGATTAAACGGAGATGTCATTCACAAATACGACATTCGTTTCAAACAACCAAACAAAGAACATATGGATATGCCCG
GACTACATTCATTAGAACATTTAATGGCTGAAAATATTAGAAATCATAGTGACAAAGTTGTTGATTTAAGTCCTATGGGT
TGCCAAACTGGTTTCTATGTATCATTTATTAATCATGATAATTATGATGATGTATTAAATATTGTTGAAGCAACTTTAAA
TGATGTGCTAAATGCTACTGAAGTGCCTGCTTGTAATGAAGTACAATGTGGCTGGGCAGCAAGTCATTCATTAGAAGGTG
CTAAAACTATCGCTCAAGCATTTCTAGACAAACGAAACGAATGGCATGATGTTTTCGGTACAGGAAAATAA

Domains

Predicted by InterProScan.

S-Ribosylhomocysteinase (LuxS) (LuxS)

(5-148)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  luxS Vibrio cholerae strain A1552

43.972

90.385

0.397