Detailed information NTG0330000

Bioinformatically predicted

Overview

• Name: irvR
• Type: Regulator
• Locus tag: FP478_RS05390
• Genome accession: NZ_CP042043
• Coordinates: 1095493..1096200 (-)
• Length: 235 a.a.
• NCBI ID: WP_029549355.1
• Uniprot ID: -
• Organism: Staphylococcus aureus strain B2-15A
• Function: regulate expression of competence genes (predicted from homology) Competence regulation

Genomic Context

Location: 1090493..1101200

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FP478_RS05370 (FP478_05370)	sufB	1090787..1092184 (+)	1398	WP_001074405.1	Fe-S cluster assembly protein SufB	-
FP478_RS05375 (FP478_05375)	-	1092252..1093301 (-)	1050	WP_114306610.1	tyrosine-type recombinase/integrase	-
FP478_RS05380 (FP478_05380)	-	1093362..1095020 (-)	1659	WP_017431789.1	DpnII family type II restriction endonuclease	-
FP478_RS05385 (FP478_05385)	-	1095112..1095297 (-)	186	WP_114306611.1	hypothetical protein	-
FP478_RS14470	-	1095347..1095481 (-)	135	WP_255777535.1	hypothetical protein	-
FP478_RS05390 (FP478_05390)	irvR	1095493..1096200 (-)	708	WP_029549355.1	helix-turn-helix domain-containing protein	Regulator
FP478_RS05395 (FP478_05395)	-	1096371..1096610 (+)	240	WP_000548576.1	helix-turn-helix transcriptional regulator	-
FP478_RS05400 (FP478_05400)	-	1096623..1097066 (+)	444	WP_000435347.1	hypothetical protein	-
FP478_RS05405 (FP478_05405)	-	1097081..1097224 (+)	144	WP_000939498.1	hypothetical protein	-
FP478_RS05410 (FP478_05410)	-	1097234..1097836 (-)	603	WP_012840514.1	hypothetical protein	-
FP478_RS05415 (FP478_05415)	-	1098279..1098464 (+)	186	WP_000933364.1	helix-turn-helix domain-containing protein	-
FP478_RS05420 (FP478_05420)	-	1098466..1099215 (+)	750	WP_001148587.1	phage antirepressor KilAC domain-containing protein	-
FP478_RS05425 (FP478_05425)	-	1099256..1099546 (+)	291	WP_000405222.1	hypothetical protein	-
FP478_RS14380	-	1099558..1099728 (-)	171	WP_000224747.1	hypothetical protein	-
FP478_RS05430 (FP478_05430)	-	1099799..1100020 (+)	222	WP_000594790.1	hypothetical protein	-
FP478_RS05435 (FP478_05435)	-	1100013..1100174 (+)	162	WP_031795048.1	DUF1270 family protein	-
FP478_RS05440 (FP478_05440)	-	1100268..1100528 (+)	261	WP_031795049.1	DUF1108 family protein	-
FP478_RS05445 (FP478_05445)	-	1100536..1100772 (+)	237	WP_000802315.1	hypothetical protein	-

Sequence

Protein

• Length: 235 a.a.
• Molecular weight: 26711.35 Da
• Isoelectric Point: 5.4096

>NTDB_id=330000 FP478_RS05390 WP_029549355.1 1095493..1096200(-) (irvR) [Staphylococcus aureus strain B2-15A]
MSSFSSNLERLMNKRDMSDSELAELVDVNRTTVTRWRKGIRSPKLDKLPEIANVFGVKPLDLIHEMDDSKVIEEIHNISS
QLTPPRQSNVLNYANSQLDEQNSKGDNVVDINSYKQDKTPVNVNGCVSAGVGERLHDETLFTEMVKGPVPPHDLALKVNG
DSMEPMFKNGEIIFVEKTHNIKNGQIGIFIIEEEAYVKKVFVEDDRLTLVSLNKEYRDLHFYRNESVRLVGKVIL

Nucleotide

• Length: 708 bp

>NTDB_id=330000 FP478_RS05390 WP_029549355.1 1095493..1096200(-) (irvR) [Staphylococcus aureus strain B2-15A]
ATGAGTTCATTTTCTTCGAATCTAGAACGTCTGATGAACAAAAGAGATATGAGTGATAGTGAATTAGCAGAATTGGTAGA
TGTTAACCGAACAACAGTCACAAGATGGAGGAAAGGTATCAGAAGTCCAAAACTAGACAAACTACCTGAAATAGCTAATG
TTTTTGGAGTTAAACCCTTAGATTTGATACATGAAATGGATGATTCGAAAGTTATTGAAGAAATTCATAACATATCATCT
CAACTCACACCTCCGCGACAAAGCAATGTACTAAACTACGCAAATAGTCAGTTAGATGAACAAAACTCTAAAGGAGATAA
CGTTGTAGATATTAATTCATATAAACAGGATAAAACTCCGGTTAATGTCAATGGTTGCGTCTCTGCCGGCGTGGGAGAAC
GTCTACACGATGAAACGCTATTCACTGAAATGGTTAAGGGACCTGTGCCACCGCATGATTTAGCATTAAAGGTTAATGGT
GACTCTATGGAACCTATGTTTAAAAATGGAGAAATTATATTTGTAGAGAAAACACACAATATAAAGAATGGTCAGATTGG
TATATTCATCATTGAAGAAGAAGCGTACGTTAAGAAAGTCTTCGTTGAAGATGATAGATTAACTTTAGTTTCACTCAATA
AAGAATACCGCGACCTTCACTTTTATAGGAATGAAAGCGTGAGGTTGGTTGGGAAGGTTATTTTATAG

Domains

Predicted by InterProScan.

• Peptidase S24-like (Peptidase_S24) (125-234)

• Helix-turn-helix (HTH_3) (8-61)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
irvR	Streptococcus mutans UA159	30.742	100	0.37