Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   EBA29_RS07000 Genome accession   NZ_CP034203
Coordinates   1357939..1358403 (-) Length   154 a.a.
NCBI ID   WP_003154622.1    Uniprot ID   A0A9Q3QIJ3
Organism   Bacillus velezensis strain 83     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1352939..1363403
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EBA29_RS06980 (EBA29_01435) - 1353420..1355240 (+) 1821 WP_021493759.1 PAS domain-containing protein -
  EBA29_RS06985 (EBA29_01436) - 1355265..1356434 (-) 1170 WP_007611083.1 aminotransferase A -
  EBA29_RS19775 (EBA29_01437) - 1356635..1356796 (-) 162 WP_007409608.1 hypothetical protein -
  EBA29_RS06995 (EBA29_01438) cheV 1356985..1357896 (+) 912 WP_014417604.1 chemotaxis protein CheV -
  EBA29_RS07000 (EBA29_01439) kre 1357939..1358403 (-) 465 WP_003154622.1 YkyB family protein Regulator
  EBA29_RS07005 (EBA29_01440) - 1358526..1359818 (-) 1293 WP_014417606.1 MFS transporter -
  EBA29_RS07010 (EBA29_01441) - 1359894..1360388 (-) 495 WP_089072484.1 L,D-transpeptidase family protein -
  EBA29_RS07015 (EBA29_01442) - 1360463..1361326 (-) 864 WP_021493757.1 metallophosphoesterase -
  EBA29_RS07020 (EBA29_01443) fadH 1361470..1362234 (+) 765 WP_003154618.1 2,4-dienoyl-CoA reductase -
  EBA29_RS07025 (EBA29_01444) - 1362348..1362905 (+) 558 WP_121984219.1 hypothetical protein -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17784.55 Da        Isoelectric Point: 10.4864

>NTDB_id=329789 EBA29_RS07000 WP_003154622.1 1357939..1358403(-) (kre) [Bacillus velezensis strain 83]
MDDHAYSKELQPTIENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSNNPRFSQQQSDVLISIGD
YYFHMPPTKEDFQHLPHLGTLNQSYRNPKAQMSLTKAKNVLQKYVGLKEKPLAANRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=329789 EBA29_RS07000 WP_003154622.1 1357939..1358403(-) (kre) [Bacillus velezensis strain 83]
ATGGACGACCACGCTTATTCGAAAGAGCTGCAGCCAACCATCGAGAATCTTTCAAAAGCTGTTTATACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTTTATCTGCTGAAAAAACGGGCATTACAAAAGCTTGTGAAAGAAGGCAAAG
GGAAAAAAATAGGGCTTCACTTTTCAAATAATCCCAGGTTTAGCCAACAGCAGTCAGACGTACTTATCTCTATCGGAGAC
TACTATTTTCACATGCCTCCAACAAAAGAAGACTTCCAGCATCTTCCGCATTTAGGTACGTTAAATCAATCGTACCGCAA
TCCTAAAGCACAAATGTCTTTGACAAAAGCGAAAAACGTATTGCAAAAATATGTGGGCTTAAAGGAAAAACCGCTTGCCG
CCAACAGGCAGCAGCCTGCTTATCATAAACCCGTATTTAAAAAACTTGGTGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(13-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

92.857

100

0.929

Multiple sequence alignment