Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   EBA29_RS05600 Genome accession   NZ_CP034203
Coordinates   1101724..1101915 (+) Length   63 a.a.
NCBI ID   WP_003155061.1    Uniprot ID   A0AAE2TKK9
Organism   Bacillus velezensis strain 83     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1096724..1106915
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EBA29_RS05565 (EBA29_01137) argF 1097575..1098546 (+) 972 WP_021494974.1 ornithine carbamoyltransferase -
  EBA29_RS05570 (EBA29_01138) - 1098622..1098801 (+) 180 WP_003155070.1 YjzC family protein -
  EBA29_RS05575 (EBA29_01139) - 1098838..1099023 (-) 186 WP_007409129.1 YjzD family protein -
  EBA29_RS05585 (EBA29_01141) - 1099284..1100018 (+) 735 WP_014417405.1 hypothetical protein -
  EBA29_RS05590 (EBA29_01142) - 1100101..1100667 (+) 567 WP_110124641.1 hypothetical protein -
  EBA29_RS05595 (EBA29_01143) med 1100758..1101711 (+) 954 WP_072177123.1 BMP family ABC transporter substrate-binding protein Regulator
  EBA29_RS05600 (EBA29_01144) comZ 1101724..1101915 (+) 192 WP_003155061.1 ComZ family protein Regulator
  EBA29_RS05605 (EBA29_01145) - 1101944..1102162 (-) 219 WP_007409123.1 hypothetical protein -
  EBA29_RS05610 (EBA29_01146) - 1102329..1103267 (+) 939 WP_007409122.1 beta-ketoacyl-ACP synthase III -
  EBA29_RS05615 (EBA29_01147) fabF 1103290..1104528 (+) 1239 WP_021494977.1 beta-ketoacyl-ACP synthase II -
  EBA29_RS05620 (EBA29_01148) - 1104611..1105396 (+) 786 WP_095060850.1 DUF2268 domain-containing protein -
  EBA29_RS05625 (EBA29_01149) - 1105570..1106556 (+) 987 WP_061862067.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7203.33 Da        Isoelectric Point: 4.2259

>NTDB_id=329782 EBA29_RS05600 WP_003155061.1 1101724..1101915(+) (comZ) [Bacillus velezensis strain 83]
MQHEKSLEFMQIAMKYLPEAKAELEKSGIDLSMEMIQPFMDLFTSVMAEAYELGRSDAGELNK

Nucleotide


Download         Length: 192 bp        

>NTDB_id=329782 EBA29_RS05600 WP_003155061.1 1101724..1101915(+) (comZ) [Bacillus velezensis strain 83]
ATGCAGCATGAAAAGTCTCTTGAATTTATGCAGATCGCGATGAAATACCTGCCGGAAGCAAAGGCGGAGCTTGAGAAATC
CGGCATAGATCTGTCTATGGAAATGATTCAGCCGTTTATGGACCTGTTTACATCGGTCATGGCGGAAGCGTATGAGCTTG
GCAGATCTGATGCCGGGGAGCTGAATAAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

86.207

92.063

0.794

Multiple sequence alignment