Detailed information
Bioinformatically predicted
Overview
| Name | pilH | Type | Machinery gene |
| Locus tag | BAMF_RS29165 | Genome accession | NC_014551 |
| Coordinates | 1705087..1705449 (+) | Length | 120 a.a. |
| NCBI ID | WP_003154238.1 | Uniprot ID | A0A150FA43 |
| Organism | Bacillus amyloliquefaciens DSM 7 = ATCC 23350 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1700087..1710449
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BAMF_RS29135 (BAMF_1699) | flgD | 1701002..1701433 (+) | 432 | WP_013352262.1 | flagellar hook assembly protein FlgD | - |
| BAMF_RS29140 (BAMF_1700) | flgG | 1701458..1702234 (+) | 777 | WP_013352263.1 | flagellar basal body rod protein FlgG | - |
| BAMF_RS29145 (BAMF_1701) | - | 1702274..1702489 (+) | 216 | WP_013352264.1 | flagellar FlbD family protein | - |
| BAMF_RS29150 (BAMF_1702) | fliL | 1702486..1702905 (+) | 420 | WP_013352265.1 | flagellar basal body-associated protein FliL | - |
| BAMF_RS29155 (BAMF_1703) | fliM | 1702939..1703937 (+) | 999 | WP_013352266.1 | flagellar motor switch protein FliM | - |
| BAMF_RS29160 (BAMF_1704) | fliY | 1703927..1705060 (+) | 1134 | WP_013352267.1 | flagellar motor switch phosphatase FliY | - |
| BAMF_RS29165 (BAMF_1705) | pilH | 1705087..1705449 (+) | 363 | WP_003154238.1 | chemotaxis protein CheY | Machinery gene |
| BAMF_RS29170 (BAMF_1706) | fliZ | 1705464..1706117 (+) | 654 | WP_013352268.1 | flagella biosynthesis regulatory protein FliZ | - |
| BAMF_RS29175 (BAMF_1707) | fliP | 1706110..1706775 (+) | 666 | WP_013352269.1 | flagellar type III secretion system pore protein FliP | - |
| BAMF_RS29180 (BAMF_1708) | fliQ | 1706790..1707059 (+) | 270 | WP_013352270.1 | flagellar biosynthesis protein FliQ | - |
| BAMF_RS29185 (BAMF_1709) | fliR | 1707066..1707845 (+) | 780 | WP_013352271.1 | flagellar biosynthetic protein FliR | - |
| BAMF_RS29190 (BAMF_1710) | flhB | 1707845..1708924 (+) | 1080 | WP_013352272.1 | flagellar biosynthesis protein FlhB | - |
Sequence
Protein
Download Length: 120 a.a. Molecular weight: 13209.53 Da Isoelectric Point: 4.6805
>NTDB_id=32962 BAMF_RS29165 WP_003154238.1 1705087..1705449(+) (pilH) [Bacillus amyloliquefaciens DSM 7 = ATCC 23350]
MAHRILIVDDAAFMRMMIKDILVKNGFDVVAEASDGAQAVEKFKEHSPDLVTMDITMPEMDGITALKEIKQIDPQAKIIM
CSAMGQQSMVIDAIQAGAKDFIVKPFQADRVLEAINKTLS
MAHRILIVDDAAFMRMMIKDILVKNGFDVVAEASDGAQAVEKFKEHSPDLVTMDITMPEMDGITALKEIKQIDPQAKIIM
CSAMGQQSMVIDAIQAGAKDFIVKPFQADRVLEAINKTLS
Nucleotide
Download Length: 363 bp
>NTDB_id=32962 BAMF_RS29165 WP_003154238.1 1705087..1705449(+) (pilH) [Bacillus amyloliquefaciens DSM 7 = ATCC 23350]
ATGGCACACAGAATTTTAATTGTAGACGATGCAGCATTTATGAGAATGATGATCAAGGATATTTTAGTGAAGAACGGTTT
TGACGTTGTAGCTGAAGCTTCGGACGGAGCACAGGCAGTCGAAAAATTCAAAGAGCATTCACCCGACCTTGTGACAATGG
ATATTACAATGCCTGAAATGGACGGGATTACCGCATTAAAGGAAATTAAACAAATCGATCCGCAGGCGAAAATCATCATG
TGTTCGGCTATGGGGCAGCAGTCAATGGTTATTGACGCGATTCAAGCCGGCGCAAAAGACTTTATCGTGAAGCCATTCCA
AGCAGACCGCGTGCTTGAAGCCATTAATAAAACATTAAGCTAA
ATGGCACACAGAATTTTAATTGTAGACGATGCAGCATTTATGAGAATGATGATCAAGGATATTTTAGTGAAGAACGGTTT
TGACGTTGTAGCTGAAGCTTCGGACGGAGCACAGGCAGTCGAAAAATTCAAAGAGCATTCACCCGACCTTGTGACAATGG
ATATTACAATGCCTGAAATGGACGGGATTACCGCATTAAAGGAAATTAAACAAATCGATCCGCAGGCGAAAATCATCATG
TGTTCGGCTATGGGGCAGCAGTCAATGGTTATTGACGCGATTCAAGCCGGCGCAAAAGACTTTATCGTGAAGCCATTCCA
AGCAGACCGCGTGCTTGAAGCCATTAATAAAACATTAAGCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilH | Synechocystis sp. PCC 6803 |
38.983 |
98.333 |
0.383 |