Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   EH197_RS10765 Genome accession   NZ_CP034169
Coordinates   2082698..2083420 (-) Length   240 a.a.
NCBI ID   WP_016181294.1    Uniprot ID   A0A6I7ZIQ1
Organism   Enterococcus avium strain 352     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2077698..2088420
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EH197_RS10735 (EH197_10735) - 2077962..2078522 (+) 561 WP_048720624.1 TetR/AcrR family transcriptional regulator -
  EH197_RS10740 (EH197_10740) - 2078641..2079078 (+) 438 WP_016181289.1 DUF948 domain-containing protein -
  EH197_RS10745 (EH197_10745) - 2079083..2079649 (+) 567 WP_048720622.1 YtxH domain-containing protein -
  EH197_RS10750 (EH197_10750) - 2079815..2080297 (+) 483 WP_016181291.1 helix-turn-helix transcriptional regulator -
  EH197_RS10755 (EH197_10755) - 2080348..2081448 (-) 1101 WP_048722264.1 Xaa-Pro peptidase family protein -
  EH197_RS10760 (EH197_10760) ccpA 2081644..2082648 (+) 1005 WP_016181293.1 catabolite control protein A -
  EH197_RS10765 (EH197_10765) treR 2082698..2083420 (-) 723 WP_016181294.1 trehalose operon repressor Regulator
  EH197_RS10770 (EH197_10770) treP 2083793..2085739 (+) 1947 WP_034876808.1 PTS system trehalose-specific EIIBC component -
  EH197_RS10775 (EH197_10775) treC 2085756..2087378 (+) 1623 WP_137439712.1 alpha,alpha-phosphotrehalase -
  EH197_RS10780 (EH197_10780) - 2087410..2087916 (-) 507 WP_137439713.1 QueT transporter family protein -

Sequence

Protein


Download         Length: 240 a.a.        Molecular weight: 27698.62 Da        Isoelectric Point: 8.0271

>NTDB_id=329523 EH197_RS10765 WP_016181294.1 2082698..2083420(-) (treR) [Enterococcus avium strain 352]
MKNYEVIYQAIERGILKGVYEAGDFLPSENKLRQSYHVSRDTIRKALSLLMANGYIQKIQGKGSLVLKREQLRFPVSGLT
SYKELQNSYGYESSTEVVSLKKIVIDDKTAHVTGFEAGAVCWKLIRTRAIDQKKVILDKDILLTTIVPELDTEIAKDSIY
RYFENQLGLTISFAEKEITIDALTDEDRELLDLNQHDINIVSVKSRVFTSDARQFQYTESRHQVDKFRFFDFARRHPSTM

Nucleotide


Download         Length: 723 bp        

>NTDB_id=329523 EH197_RS10765 WP_016181294.1 2082698..2083420(-) (treR) [Enterococcus avium strain 352]
ATGAAAAACTATGAAGTAATTTATCAGGCGATTGAGCGAGGAATTCTAAAGGGTGTGTATGAAGCAGGAGATTTCCTACC
CAGTGAGAACAAACTACGGCAAAGCTATCATGTCTCTCGTGACACGATACGCAAAGCCTTATCTCTTTTAATGGCTAACG
GTTATATTCAGAAAATCCAAGGCAAGGGGTCACTTGTCTTGAAACGGGAGCAATTGCGATTTCCTGTATCAGGTCTGACC
AGCTACAAAGAATTGCAGAATTCTTATGGCTATGAAAGTAGTACCGAAGTTGTTAGTCTTAAAAAAATTGTGATTGATGA
TAAAACAGCCCATGTGACAGGCTTTGAAGCAGGCGCCGTTTGTTGGAAATTGATCCGTACGCGTGCCATTGATCAAAAGA
AAGTAATCCTCGACAAGGACATACTTCTGACGACTATCGTACCAGAATTAGATACTGAAATTGCAAAAGATTCAATTTAT
CGCTATTTTGAAAACCAACTTGGATTGACTATTTCTTTCGCTGAAAAAGAAATTACGATTGATGCATTGACTGATGAAGA
TCGTGAACTGCTTGATCTCAATCAGCATGACATCAATATCGTTTCAGTAAAGAGCCGCGTTTTTACCAGCGATGCCCGTC
AGTTCCAATATACTGAAAGTCGTCATCAAGTGGATAAATTTCGTTTCTTTGATTTTGCTCGACGTCATCCTTCGACGATG
TAG

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, gntR family (GntR)

(4-66)

UTRA domain (UTRA)

(89-228)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6I7ZIQ1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

49.576

98.333

0.487

Multiple sequence alignment