Detailed information NTG0329350

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: EAL91_RS02050
• Genome accession: NZ_CP034147
• Coordinates: 420985..422427 (-)
• Length: 480 a.a.
• NCBI ID: WP_121054592.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain HP14039
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 415985..427427

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EAL91_RS02025	recG	417121..418992 (-)	1872	WP_121054590.1	ATP-dependent DNA helicase RecG	-
EAL91_RS02030	-	419074..419421 (+)	348	WP_078267574.1	hypothetical protein	-
EAL91_RS02035	-	419425..420060 (+)	636	WP_000668071.1	outer membrane protein	-
EAL91_RS02040	-	420057..420809 (-)	753	WP_121054591.1	exodeoxyribonuclease III	-
EAL91_RS02050	comH	420985..422427 (-)	1443	WP_121054592.1	competence protein	Machinery gene
EAL91_RS02055	dnaA	422656..424029 (-)	1374	WP_121054593.1	chromosomal replication initiator protein DnaA	-
EAL91_RS02060	-	424182..424724 (+)	543	WP_121054594.1	purine-nucleoside phosphorylase	-
EAL91_RS02065	-	424759..424998 (+)	240	WP_000461837.1	DUF2443 domain-containing protein	-
EAL91_RS02070	glmS	424999..426792 (+)	1794	WP_121054595.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-

Sequence

Protein

• Length: 480 a.a.
• Molecular weight: 54843.87 Da
• Isoelectric Point: 7.2022

>NTDB_id=329350 EAL91_RS02050 WP_121054592.1 420985..422427(-) (comH) [Helicobacter pylori strain HP14039]
MKKSLCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKEPRQVLGVYNISPHKKLTLTITHISTAIVYQPLDE
KLSLETTLNPNRPTIPRNTQIVFSSKELKEPHAHQIPSLNAPMQKPQNKPSSSQQSPQNFSYPESKLGSKNSKNSLLQPL
VTPSKISPTNEVKTPTNEIKPPLKHSSEDQENNLFIAPPTEKTLPNNNASHADTYENNESSENRDSVEKQAIRDPNIKEF
ACGKWVYDDENLQAYRPSILKRVDADKQTATDITPCDYSMAENKSGKIITPYTKISVHKTEPLEEPQTFEAKNNFAILQA
RSSTEKCKRARARKDGTTRQCYLIEEPLKQAWESEYEITTQLVKAIYERPKQDDQVEPTFYETSELAYSSTRKSEITRNE
LNLNEKFMEFVEVYEGHYLNDIVKESSEYKEWVKNHVRFKEGVCVALEIEEQPRAKSTPLSIENSRVVCVKKGNYLFNEV

Nucleotide

• Length: 1443 bp

>NTDB_id=329350 EAL91_RS02050 WP_121054592.1 420985..422427(-) (comH) [Helicobacter pylori strain HP14039]
ATGAAAAAATCCCTTTGTCTATCTTTCTTTCTGACTTTCTCTAACCCTCTTCAAGCTCTTGTGATCGAGCTTTTAGAAGA
GATCAAAACTTCGCCGCATAAAGGCACTTTTAAGGCTAAAGTCCTTGATTCTAAAGAACCAAGACAAGTTTTAGGCGTTT
ATAATATCTCCCCACACAAAAAACTCACGCTCACTATCACCCACATATCCACTGCAATTGTCTATCAACCCCTTGATGAA
AAACTTTCTTTAGAAACGACCTTAAACCCTAACCGCCCTACTATCCCTAGAAACACCCAAATCGTTTTTTCTTCAAAAGA
ATTGAAAGAACCGCACGCGCACCAAATACCTTCTTTAAACGCGCCCATGCAAAAACCACAAAACAAACCCAGCTCATCGC
AACAATCTCCTCAAAACTTTTCTTACCCAGAGTCCAAACTAGGCTCTAAAAACTCTAAAAACAGCCTTTTACAGCCTTTA
GTAACTCCTAGTAAAATAAGCCCCACTAACGAAGTTAAAACGCCAACAAACGAAATTAAACCCCCTTTAAAACATTCTTC
AGAAGATCAAGAAAACAACCTTTTTATAGCACCGCCTACTGAAAAGACGCTCCCCAATAACAACGCTTCTCATGCTGATA
CTTATGAAAACAATGAAAGCAGCGAAAATAGGGATAGTGTGGAAAAACAAGCGATTAGAGATCCTAATATCAAAGAATTT
GCATGCGGGAAGTGGGTTTATGACGATGAAAATTTACAAGCCTATCGCCCAAGCATTTTAAAACGCGTTGATGCAGACAA
ACAGACTGCGACAGATATTACCCCTTGCGATTACAGCATGGCTGAAAATAAAAGCGGTAAAATCATTACCCCTTATACTA
AAATCTCTGTTCATAAAACAGAGCCTTTAGAAGAGCCTCAAACTTTTGAAGCTAAAAATAATTTCGCCATTCTTCAAGCC
AGAAGCTCTACAGAAAAATGCAAAAGGGCTAGAGCAAGAAAAGACGGCACGACTAGGCAATGCTATCTGATAGAAGAGCC
TTTAAAACAAGCGTGGGAGAGTGAGTATGAAATCACCACGCAATTAGTGAAAGCCATTTATGAGCGCCCCAAACAAGACG
ATCAAGTAGAGCCGACTTTTTATGAAACCAGCGAATTGGCTTATTCTTCCACACGAAAAAGCGAAATAACGCGCAATGAA
TTGAATTTGAATGAAAAATTCATGGAATTTGTGGAAGTGTATGAGGGGCATTATTTAAACGATATAGTCAAAGAAAGCAG
TGAATACAAAGAATGGGTTAAAAACCATGTGCGCTTTAAAGAAGGGGTGTGTGTTGCTTTAGAAATAGAAGAACAGCCAC
GAGCCAAAAGCACGCCTTTGAGTATTGAAAACTCTCGTGTTGTATGTGTCAAAAAGGGGAATTATTTATTCAATGAAGTT
TAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	93.75	100	0.938