Detailed information
Bioinformatically predicted
Overview
| Name | clpE | Type | Regulator |
| Locus tag | SUB_RS06405 | Genome accession | NC_012004 |
| Coordinates | 1266754..1269024 (+) | Length | 756 a.a. |
| NCBI ID | WP_012658755.1 | Uniprot ID | B9DUU4 |
| Organism | Streptococcus uberis 0140J | ||
| Function | repress competence development (at the early growth phase) (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1261754..1274024
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SUB_RS06375 (SUB1275) | - | 1262090..1262305 (-) | 216 | WP_012658749.1 | exodeoxyribonuclease VII small subunit | - |
| SUB_RS06380 (SUB1276) | xseA | 1262295..1263623 (-) | 1329 | WP_012658750.1 | exodeoxyribonuclease VII large subunit | - |
| SUB_RS06385 (SUB1277) | - | 1263764..1264618 (-) | 855 | WP_012658751.1 | bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase | - |
| SUB_RS06390 (SUB1278) | - | 1264722..1265456 (-) | 735 | WP_012658752.1 | amino acid ABC transporter ATP-binding protein | - |
| SUB_RS06395 (SUB1279) | - | 1265453..1266142 (-) | 690 | WP_012658753.1 | amino acid ABC transporter permease | - |
| SUB_RS06400 (SUB1280) | - | 1266269..1266499 (-) | 231 | WP_012658754.1 | DUF1797 family protein | - |
| SUB_RS06405 (SUB1281) | clpE | 1266754..1269024 (+) | 2271 | WP_012658755.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| SUB_RS06410 (SUB1282) | - | 1269158..1269613 (+) | 456 | WP_012658756.1 | NUDIX hydrolase | - |
| SUB_RS06415 (SUB1283) | - | 1269665..1269976 (+) | 312 | WP_012658757.1 | DUF1827 family protein | - |
| SUB_RS06420 (SUB1284) | ileS | 1270079..1272874 (-) | 2796 | WP_012658758.1 | isoleucine--tRNA ligase | - |
| SUB_RS06425 (SUB1285) | - | 1273127..1273891 (-) | 765 | WP_012658759.1 | DivIVA domain-containing protein | - |
Sequence
Protein
Download Length: 756 a.a. Molecular weight: 84147.36 Da Isoelectric Point: 5.2145
>NTDB_id=32933 SUB_RS06405 WP_012658755.1 1266754..1269024(+) (clpE) [Streptococcus uberis 0140J]
MLCQNCKLNEATIHLYTNVNGKQRQVDLCQNCYQIMKTDTNNPILGGQNGKPQQDSINPFFDDFFGDLNNFRAFGQLPNT
PPTQSGGGQGNGGHRGGHNGSQAQAAQTQKPNGLLEEFGINVTDIARRGDIDPVIGRDDEIVRVIEILNRRTKNNPVLIG
EPGVGKTAVVEGLAQKIVDGDVPHKLQHKQVIRLDVVSLVQGTGIRGQFEERMQKLMEEIRNRQDVILFIDEIHEIVGAG
SAGDGNMDAGNILKPALARGELQLVGATTLNEYRIIEKDAALERRMQPVKVDEPSVEETITILKGIQSKYEDYHHVKYSQ
DAIEAAAHLSNRYIQDRFLPDKAIDLLDEAGSKMNLTLNFVDPKEIDKRLVEAENLKAQATRDEDFERAAYFRDQIAKYK
ELQKQKVDDEDTPIITEKTIEAIVEQKTNIPVGDLKEKEQSQLVNLSDDLKAHVIGQDDAVEKIAKAIRRNRVGLGSPNR
PIGSFLFVGPTGVGKTELSKQLAIELFGSADNMIRFDMSEYMEKHAVSKLVGAPPGYVGYEEAGQLTEKVRRNPYSLILL
DEVEKAHPDVMHMFLQVLDDGRLTDGQGRTVSFKDTIIIMTSNAGTGRVEASVGFGAAREGRTNSVLGELSNYFSPEFMN
RFDGIIEFQPLSKENLLHIVDLMLEDVNARLSHNNIHLEVTAKVKEKLVDLGYDPKMGARPLRRTIQEHIEDAITDFYIE
NPTEKNLKAMMSSNGNILIKAIKAKSSEEPLDMPVK
MLCQNCKLNEATIHLYTNVNGKQRQVDLCQNCYQIMKTDTNNPILGGQNGKPQQDSINPFFDDFFGDLNNFRAFGQLPNT
PPTQSGGGQGNGGHRGGHNGSQAQAAQTQKPNGLLEEFGINVTDIARRGDIDPVIGRDDEIVRVIEILNRRTKNNPVLIG
EPGVGKTAVVEGLAQKIVDGDVPHKLQHKQVIRLDVVSLVQGTGIRGQFEERMQKLMEEIRNRQDVILFIDEIHEIVGAG
SAGDGNMDAGNILKPALARGELQLVGATTLNEYRIIEKDAALERRMQPVKVDEPSVEETITILKGIQSKYEDYHHVKYSQ
DAIEAAAHLSNRYIQDRFLPDKAIDLLDEAGSKMNLTLNFVDPKEIDKRLVEAENLKAQATRDEDFERAAYFRDQIAKYK
ELQKQKVDDEDTPIITEKTIEAIVEQKTNIPVGDLKEKEQSQLVNLSDDLKAHVIGQDDAVEKIAKAIRRNRVGLGSPNR
PIGSFLFVGPTGVGKTELSKQLAIELFGSADNMIRFDMSEYMEKHAVSKLVGAPPGYVGYEEAGQLTEKVRRNPYSLILL
DEVEKAHPDVMHMFLQVLDDGRLTDGQGRTVSFKDTIIIMTSNAGTGRVEASVGFGAAREGRTNSVLGELSNYFSPEFMN
RFDGIIEFQPLSKENLLHIVDLMLEDVNARLSHNNIHLEVTAKVKEKLVDLGYDPKMGARPLRRTIQEHIEDAITDFYIE
NPTEKNLKAMMSSNGNILIKAIKAKSSEEPLDMPVK
Nucleotide
Download Length: 2271 bp
>NTDB_id=32933 SUB_RS06405 WP_012658755.1 1266754..1269024(+) (clpE) [Streptococcus uberis 0140J]
ATGCTTTGTCAAAATTGTAAATTAAATGAAGCAACTATTCATCTATATACGAATGTGAATGGAAAACAAAGACAGGTAGA
TCTTTGTCAAAATTGTTATCAAATCATGAAAACAGATACTAATAATCCTATCCTAGGTGGTCAAAATGGGAAACCACAAC
AAGATTCGATAAACCCATTCTTTGATGACTTTTTTGGTGATCTCAACAATTTCAGGGCATTTGGTCAATTGCCAAACACG
CCACCGACTCAATCTGGAGGCGGACAAGGTAATGGGGGACACCGTGGAGGACACAACGGGTCACAGGCTCAAGCTGCTCA
AACGCAAAAACCAAATGGCCTTTTAGAAGAATTCGGTATCAATGTAACTGATATTGCCAGAAGAGGTGATATTGATCCTG
TTATCGGACGCGATGATGAAATTGTTCGCGTCATTGAAATTCTAAATCGACGGACTAAAAATAACCCTGTCCTTATTGGG
GAACCTGGTGTTGGTAAAACTGCAGTGGTGGAGGGTTTAGCTCAAAAAATTGTAGATGGGGATGTTCCACATAAATTACA
ACACAAACAAGTCATTCGATTAGATGTAGTCAGTTTAGTTCAAGGAACTGGCATTCGTGGTCAGTTCGAAGAACGCATGC
AAAAACTAATGGAAGAAATCCGAAATCGCCAAGATGTCATTTTATTTATTGACGAAATTCATGAGATTGTCGGTGCTGGT
AGTGCAGGCGATGGCAATATGGATGCTGGTAACATTTTAAAACCTGCCCTTGCTCGTGGAGAATTACAACTGGTTGGTGC
AACGACGTTGAATGAATATCGGATCATTGAAAAAGATGCTGCACTTGAAAGACGTATGCAGCCAGTTAAAGTTGATGAAC
CTTCAGTTGAGGAAACCATCACTATTTTAAAAGGGATTCAAAGCAAATATGAAGATTACCATCATGTGAAATACAGTCAA
GATGCTATCGAAGCTGCTGCTCACCTTTCTAATAGGTATATTCAGGATCGTTTCCTTCCCGATAAAGCCATTGATTTGCT
CGACGAAGCCGGTTCTAAAATGAACTTGACATTAAACTTTGTTGATCCCAAAGAGATTGATAAGAGATTAGTCGAAGCTG
AAAACTTAAAAGCGCAAGCCACTAGGGATGAAGATTTTGAACGCGCAGCTTACTTCAGAGACCAAATTGCAAAATACAAA
GAATTGCAAAAACAAAAGGTAGACGACGAAGACACTCCTATTATCACAGAAAAAACAATTGAAGCCATTGTTGAACAAAA
AACCAATATTCCAGTTGGCGATTTAAAGGAAAAAGAACAATCCCAATTGGTCAACTTATCAGATGATCTTAAAGCGCATG
TCATCGGTCAAGATGATGCGGTTGAAAAGATTGCAAAAGCTATTCGACGAAATCGTGTCGGACTTGGTAGCCCTAATCGT
CCTATTGGTTCTTTCCTTTTCGTTGGACCGACTGGTGTTGGTAAAACAGAGCTTTCTAAGCAATTGGCTATTGAACTTTT
TGGATCTGCTGATAATATGATTCGATTTGACATGTCGGAATACATGGAAAAACATGCTGTTTCTAAATTGGTAGGAGCGC
CTCCAGGATATGTTGGTTATGAGGAAGCTGGTCAGCTGACAGAAAAAGTTAGACGGAACCCATACTCACTTATACTTCTG
GATGAAGTTGAGAAGGCCCATCCTGATGTGATGCATATGTTCTTACAAGTTTTGGATGATGGTCGCTTAACGGATGGACA
AGGTCGAACTGTGAGCTTTAAGGACACTATTATCATCATGACTTCAAATGCGGGAACAGGACGCGTTGAAGCTTCAGTTG
GTTTTGGTGCAGCGCGTGAAGGACGTACAAACTCTGTTTTAGGCGAATTAAGTAACTACTTTAGTCCAGAATTTATGAAC
CGTTTTGATGGTATCATTGAATTCCAACCATTAAGTAAAGAAAACTTACTCCACATTGTAGATTTAATGTTGGAAGATGT
TAATGCTCGCTTATCTCATAACAATATTCATCTTGAAGTAACAGCTAAGGTTAAAGAAAAATTGGTTGATCTTGGCTATG
ACCCTAAAATGGGGGCCCGTCCTCTAAGAAGGACCATTCAAGAGCATATCGAAGATGCTATTACAGATTTCTACATAGAA
AATCCAACAGAAAAAAATCTCAAAGCTATGATGTCAAGTAATGGGAATATTCTTATTAAAGCCATTAAAGCGAAATCAAG
TGAAGAACCGCTTGATATGCCAGTTAAATAA
ATGCTTTGTCAAAATTGTAAATTAAATGAAGCAACTATTCATCTATATACGAATGTGAATGGAAAACAAAGACAGGTAGA
TCTTTGTCAAAATTGTTATCAAATCATGAAAACAGATACTAATAATCCTATCCTAGGTGGTCAAAATGGGAAACCACAAC
AAGATTCGATAAACCCATTCTTTGATGACTTTTTTGGTGATCTCAACAATTTCAGGGCATTTGGTCAATTGCCAAACACG
CCACCGACTCAATCTGGAGGCGGACAAGGTAATGGGGGACACCGTGGAGGACACAACGGGTCACAGGCTCAAGCTGCTCA
AACGCAAAAACCAAATGGCCTTTTAGAAGAATTCGGTATCAATGTAACTGATATTGCCAGAAGAGGTGATATTGATCCTG
TTATCGGACGCGATGATGAAATTGTTCGCGTCATTGAAATTCTAAATCGACGGACTAAAAATAACCCTGTCCTTATTGGG
GAACCTGGTGTTGGTAAAACTGCAGTGGTGGAGGGTTTAGCTCAAAAAATTGTAGATGGGGATGTTCCACATAAATTACA
ACACAAACAAGTCATTCGATTAGATGTAGTCAGTTTAGTTCAAGGAACTGGCATTCGTGGTCAGTTCGAAGAACGCATGC
AAAAACTAATGGAAGAAATCCGAAATCGCCAAGATGTCATTTTATTTATTGACGAAATTCATGAGATTGTCGGTGCTGGT
AGTGCAGGCGATGGCAATATGGATGCTGGTAACATTTTAAAACCTGCCCTTGCTCGTGGAGAATTACAACTGGTTGGTGC
AACGACGTTGAATGAATATCGGATCATTGAAAAAGATGCTGCACTTGAAAGACGTATGCAGCCAGTTAAAGTTGATGAAC
CTTCAGTTGAGGAAACCATCACTATTTTAAAAGGGATTCAAAGCAAATATGAAGATTACCATCATGTGAAATACAGTCAA
GATGCTATCGAAGCTGCTGCTCACCTTTCTAATAGGTATATTCAGGATCGTTTCCTTCCCGATAAAGCCATTGATTTGCT
CGACGAAGCCGGTTCTAAAATGAACTTGACATTAAACTTTGTTGATCCCAAAGAGATTGATAAGAGATTAGTCGAAGCTG
AAAACTTAAAAGCGCAAGCCACTAGGGATGAAGATTTTGAACGCGCAGCTTACTTCAGAGACCAAATTGCAAAATACAAA
GAATTGCAAAAACAAAAGGTAGACGACGAAGACACTCCTATTATCACAGAAAAAACAATTGAAGCCATTGTTGAACAAAA
AACCAATATTCCAGTTGGCGATTTAAAGGAAAAAGAACAATCCCAATTGGTCAACTTATCAGATGATCTTAAAGCGCATG
TCATCGGTCAAGATGATGCGGTTGAAAAGATTGCAAAAGCTATTCGACGAAATCGTGTCGGACTTGGTAGCCCTAATCGT
CCTATTGGTTCTTTCCTTTTCGTTGGACCGACTGGTGTTGGTAAAACAGAGCTTTCTAAGCAATTGGCTATTGAACTTTT
TGGATCTGCTGATAATATGATTCGATTTGACATGTCGGAATACATGGAAAAACATGCTGTTTCTAAATTGGTAGGAGCGC
CTCCAGGATATGTTGGTTATGAGGAAGCTGGTCAGCTGACAGAAAAAGTTAGACGGAACCCATACTCACTTATACTTCTG
GATGAAGTTGAGAAGGCCCATCCTGATGTGATGCATATGTTCTTACAAGTTTTGGATGATGGTCGCTTAACGGATGGACA
AGGTCGAACTGTGAGCTTTAAGGACACTATTATCATCATGACTTCAAATGCGGGAACAGGACGCGTTGAAGCTTCAGTTG
GTTTTGGTGCAGCGCGTGAAGGACGTACAAACTCTGTTTTAGGCGAATTAAGTAACTACTTTAGTCCAGAATTTATGAAC
CGTTTTGATGGTATCATTGAATTCCAACCATTAAGTAAAGAAAACTTACTCCACATTGTAGATTTAATGTTGGAAGATGT
TAATGCTCGCTTATCTCATAACAATATTCATCTTGAAGTAACAGCTAAGGTTAAAGAAAAATTGGTTGATCTTGGCTATG
ACCCTAAAATGGGGGCCCGTCCTCTAAGAAGGACCATTCAAGAGCATATCGAAGATGCTATTACAGATTTCTACATAGAA
AATCCAACAGAAAAAAATCTCAAAGCTATGATGTCAAGTAATGGGAATATTCTTATTAAAGCCATTAAAGCGAAATCAAG
TGAAGAACCGCTTGATATGCCAGTTAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpE | Streptococcus mutans UA159 |
86.443 |
98.545 |
0.852 |
| clpE | Streptococcus pneumoniae Rx1 |
83.245 |
99.471 |
0.828 |
| clpE | Streptococcus pneumoniae D39 |
83.245 |
99.471 |
0.828 |
| clpE | Streptococcus pneumoniae R6 |
83.245 |
99.471 |
0.828 |
| clpE | Streptococcus pneumoniae TIGR4 |
83.112 |
99.471 |
0.827 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
77.596 |
96.825 |
0.751 |
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
52.673 |
84.127 |
0.443 |
| clpC | Streptococcus pneumoniae Rx1 |
48.71 |
82.011 |
0.399 |
| clpC | Streptococcus pneumoniae TIGR4 |
48.71 |
82.011 |
0.399 |
| clpC | Streptococcus pneumoniae D39 |
48.71 |
82.011 |
0.399 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
47.917 |
82.54 |
0.396 |
| clpC | Streptococcus mutans UA159 |
47.981 |
81.878 |
0.393 |
| clpC | Streptococcus thermophilus LMD-9 |
46.785 |
82.275 |
0.385 |
| clpC | Streptococcus thermophilus LMG 18311 |
46.463 |
82.275 |
0.382 |