Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   SUB_RS02855 Genome accession   NC_012004
Coordinates   523544..524353 (+) Length   269 a.a.
NCBI ID   WP_012658079.1    Uniprot ID   A0A6L6G9B3
Organism   Streptococcus uberis 0140J     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 518544..529353
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SUB_RS02830 (SUB0549) - 518900..519601 (-) 702 WP_012658075.1 amino acid ABC transporter permease -
  SUB_RS02835 (SUB0550) - 519616..520431 (-) 816 WP_012658076.1 transporter substrate-binding domain-containing protein -
  SUB_RS02840 (SUB0551) - 520445..521224 (-) 780 WP_012658077.1 amino acid ABC transporter ATP-binding protein -
  SUB_RS02845 (SUB0552) vicR 521479..522189 (+) 711 WP_015912156.1 response regulator YycF Regulator
  SUB_RS02850 (SUB0553) vicK 522182..523540 (+) 1359 WP_012658078.1 cell wall metabolism sensor histidine kinase VicK Regulator
  SUB_RS02855 (SUB0554) vicX 523544..524353 (+) 810 WP_012658079.1 MBL fold metallo-hydrolase Regulator
  SUB_RS02860 (SUB0555) rnc 524512..525204 (+) 693 WP_012658080.1 ribonuclease III -
  SUB_RS02865 (SUB0556) smc 525205..528750 (+) 3546 WP_012658081.1 chromosome segregation protein SMC -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30186.27 Da        Isoelectric Point: 5.9911

>NTDB_id=32920 SUB_RS02855 WP_012658079.1 523544..524353(+) (vicX) [Streptococcus uberis 0140J]
MEIEGFNYSILASGSTGNSFYLETPKKKILVDAGLTGKKITSLLAEIDRKPEDLDAIFITHEHSDHIKGVGVLARKYHLD
VYANEKTWQILDDRNMIGKIDVSQKHVFERDKMITFGDIDIESFGVSHDAYDPQFYRFMKDNKSFVMLTDTGYVSDRMSG
IIENADAYLIESNHDIEILRSGSYPWSLKQRILSDKGHLSNEDGAGAMIRSMGNKTKKIYLGHLSKENNIKELAHMTMEN
QLAKADLPVGSAFKVLDTSPDSACPLTSI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=32920 SUB_RS02855 WP_012658079.1 523544..524353(+) (vicX) [Streptococcus uberis 0140J]
ATGGAAATAGAAGGATTTAATTACAGTATATTAGCATCAGGGTCAACGGGAAATAGTTTTTATTTAGAAACACCTAAAAA
GAAAATTTTGGTTGATGCTGGTTTAACTGGCAAAAAAATAACCAGCCTTTTAGCAGAAATTGATCGAAAACCAGAAGATT
TGGATGCTATTTTCATCACTCATGAACATTCAGATCATATCAAAGGGGTTGGAGTATTAGCTCGAAAATACCACTTAGAC
GTATATGCTAATGAGAAAACCTGGCAAATTTTGGATGACCGCAATATGATTGGGAAAATTGATGTTTCCCAAAAACATGT
CTTTGAAAGAGATAAAATGATTACTTTTGGAGATATTGATATTGAAAGTTTTGGAGTGAGTCATGATGCTTATGATCCTC
AATTTTATCGTTTCATGAAAGATAACAAATCTTTTGTCATGTTGACTGATACGGGTTATGTTAGTGACAGAATGTCTGGT
ATTATTGAAAATGCAGATGCCTATTTGATAGAATCCAATCATGATATTGAAATATTGCGTTCAGGTTCATACCCTTGGAG
TTTAAAACAACGCATCCTTTCTGATAAAGGTCATCTTTCAAATGAGGATGGCGCAGGGGCGATGATTCGTAGCATGGGAA
ATAAAACCAAAAAAATTTATTTGGGACATTTGAGTAAAGAAAATAACATTAAAGAATTAGCTCACATGACCATGGAAAAT
CAGTTGGCTAAAGCCGACTTACCAGTTGGATCAGCATTTAAGGTATTAGATACTTCCCCTGATTCAGCTTGCCCTTTAAC
CAGCATATAA

Domains

Predicted by InterproScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(28-216)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6L6G9B3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

76.58

100

0.766

Multiple sequence alignment