Detailed information    

insolico Bioinformatically predicted

Overview

Name   braS   Type   Regulator
Locus tag   EH162_RS04845 Genome accession   NZ_CP034111
Coordinates   967027..967923 (+) Length   298 a.a.
NCBI ID   WP_002437988.1    Uniprot ID   A0A4Q9W434
Organism   Staphylococcus epidermidis strain CDC120     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 962027..972923
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EH162_RS04825 - 962712..964256 (+) 1545 WP_124726195.1 NAD(P)H-binding protein -
  EH162_RS04830 - 964379..965848 (-) 1470 WP_058649708.1 alkaline phosphatase -
  EH162_RS04835 - 966146..966325 (+) 180 WP_001830653.1 hypothetical protein -
  EH162_RS04840 braR 966356..967021 (+) 666 WP_001830679.1 response regulator transcription factor Regulator
  EH162_RS04845 braS 967027..967923 (+) 897 WP_002437988.1 sensor histidine kinase Regulator
  EH162_RS04850 - 968034..968783 (+) 750 WP_001830627.1 ABC transporter ATP-binding protein -
  EH162_RS04855 - 968785..970797 (+) 2013 WP_002456335.1 ABC transporter permease -
  EH162_RS04860 - 970901..971491 (+) 591 WP_001830621.1 DUF4064 domain-containing protein -

Sequence

Protein


Download         Length: 298 a.a.        Molecular weight: 34882.57 Da        Isoelectric Point: 7.2750

>NTDB_id=329113 EH162_RS04845 WP_002437988.1 967027..967923(+) (braS) [Staphylococcus epidermidis strain CDC120]
MKFAYIQSIRNEISIILIILLFFALIFYVFSLPFDAYVLAISIILLLMCVRWWIKYLSFKKNEHLKDKVAYLEHELAHVK
NQQIEYRNDVESYFLTWVHQIKTPITASQLLLERNEENVVNRVRQEIVHIDNYTSLALSYLKLLNEESDMTITKVTVDDL
IRPLLLKYRIQFIEQKTQIHYKKSEDIILTDAQWASIMIEQLLNNALKYAKGKDIWIDFDVANQTLQIKDNGIGISKADI
PKIFDKGYSGFNGRLNEQSTGIGLFIVQHIANHLNIQVTVQSELNHGTVFFIHFTKEK

Nucleotide


Download         Length: 897 bp        

>NTDB_id=329113 EH162_RS04845 WP_002437988.1 967027..967923(+) (braS) [Staphylococcus epidermidis strain CDC120]
ATGAAGTTTGCATATATTCAATCGATTCGTAATGAGATTTCAATTATTTTAATAATTCTATTATTTTTTGCACTTATATT
TTATGTGTTTTCTTTACCTTTTGATGCATACGTACTTGCAATCAGTATAATATTACTATTGATGTGTGTACGTTGGTGGA
TAAAGTATTTAAGTTTTAAAAAGAACGAACATCTTAAAGATAAAGTAGCATATTTAGAACATGAGTTAGCACATGTTAAG
AATCAGCAAATTGAATATCGTAACGATGTTGAAAGTTATTTTTTAACATGGGTACATCAAATTAAAACACCTATCACTGC
CTCACAATTACTTTTGGAGAGAAACGAGGAGAATGTAGTTAATCGTGTTAGACAAGAAATTGTGCACATTGATAATTATA
CAAGTCTCGCATTAAGTTATTTAAAATTATTAAATGAAGAGTCAGATATGACAATTACCAAAGTGACAGTTGATGATTTG
ATTCGCCCGTTGCTTTTAAAATATAGAATTCAGTTTATTGAGCAAAAGACGCAAATCCATTATAAAAAAAGTGAGGACAT
TATTTTAACCGATGCACAATGGGCGTCTATAATGATAGAGCAACTTTTAAATAATGCTTTAAAATATGCTAAAGGTAAAG
ATATTTGGATAGATTTTGATGTTGCCAATCAAACTCTACAGATTAAAGATAATGGTATTGGGATTAGTAAAGCAGATATT
CCTAAAATTTTTGATAAAGGATACTCAGGATTTAACGGTAGATTGAATGAACAATCAACTGGTATAGGTTTATTTATAGT
GCAACACATTGCAAATCATTTAAATATACAAGTAACTGTACAATCAGAATTGAATCATGGGACAGTATTTTTTATACATT
TTACTAAAGAAAAATAA

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(197-296)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A4Q9W434

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

59.661

98.993

0.591

Multiple sequence alignment