Detailed information
Bioinformatically predicted
Overview
| Name | comN | Type | Machinery gene |
| Locus tag | EIA51_RS10045 | Genome accession | NZ_CP034110 |
| Coordinates | 2109779..2110300 (+) | Length | 173 a.a. |
| NCBI ID | WP_017806950.1 | Uniprot ID | A0A0F5ER87 |
| Organism | Avibacterium paragallinarum strain FARPER-174 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2104779..2115300
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EIA51_RS10005 (EIA51_10005) | tolQ | 2104947..2105630 (+) | 684 | WP_035688447.1 | protein TolQ | - |
| EIA51_RS10010 (EIA51_10010) | tolR | 2105682..2106104 (+) | 423 | WP_035688444.1 | colicin uptake protein TolR | - |
| EIA51_RS10015 (EIA51_10015) | tolA | 2106121..2107335 (+) | 1215 | WP_035688442.1 | cell envelope integrity protein TolA | - |
| EIA51_RS10020 (EIA51_10020) | tolB | 2107387..2108676 (+) | 1290 | WP_233570698.1 | Tol-Pal system beta propeller repeat protein TolB | - |
| EIA51_RS10025 (EIA51_10025) | pal | 2108687..2109139 (+) | 453 | WP_017806949.1 | peptidoglycan-associated lipoprotein Pal | - |
| EIA51_RS10045 (EIA51_10045) | comN | 2109779..2110300 (+) | 522 | WP_017806950.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | Machinery gene |
| EIA51_RS10050 (EIA51_10050) | - | 2110301..2111020 (+) | 720 | WP_035688438.1 | type II secretion system protein J | - |
| EIA51_RS10055 (EIA51_10055) | - | 2111022..2111687 (+) | 666 | WP_051128113.1 | DUF2572 family protein | - |
| EIA51_RS10060 (EIA51_10060) | - | 2111668..2111973 (+) | 306 | WP_035688436.1 | DUF5374 domain-containing protein | - |
Sequence
Protein
Download Length: 173 a.a. Molecular weight: 20049.50 Da Isoelectric Point: 8.4767
>NTDB_id=329098 EIA51_RS10045 WP_017806950.1 2109779..2110300(+) (comN) [Avibacterium paragallinarum strain FARPER-174]
MNVKGFTLLESLISLLILSILLLMALPIWQQNHNEAVLEKEQHRLYLFLRYIQSRVENSNDIWFLVANRDLLSKKWCISA
QIKQDKICNCLQPQYCSNELMVNIYTPMFPQETMIISKNYYPKEMARLSGIRNTVQSDCFLLQAGDKRTLFSFFNVGSLK
LKDISSLSACGDK
MNVKGFTLLESLISLLILSILLLMALPIWQQNHNEAVLEKEQHRLYLFLRYIQSRVENSNDIWFLVANRDLLSKKWCISA
QIKQDKICNCLQPQYCSNELMVNIYTPMFPQETMIISKNYYPKEMARLSGIRNTVQSDCFLLQAGDKRTLFSFFNVGSLK
LKDISSLSACGDK
Nucleotide
Download Length: 522 bp
>NTDB_id=329098 EIA51_RS10045 WP_017806950.1 2109779..2110300(+) (comN) [Avibacterium paragallinarum strain FARPER-174]
ATGAATGTAAAAGGTTTTACATTGCTTGAATCATTGATTTCATTATTAATTTTAAGCATATTACTATTAATGGCACTGCC
TATTTGGCAACAAAATCATAATGAAGCAGTGCTTGAAAAAGAGCAGCATAGGCTTTATCTTTTTTTACGTTATATTCAAA
GTAGAGTCGAAAACTCTAATGACATATGGTTTTTAGTCGCAAATCGTGATCTCCTTAGCAAGAAATGGTGTATTTCTGCT
CAAATAAAACAAGATAAAATCTGTAATTGTTTACAGCCCCAATATTGTTCCAATGAATTAATGGTTAATATTTATACGCC
GATGTTCCCGCAAGAAACAATGATTATAAGTAAAAACTATTATCCTAAAGAAATGGCAAGACTGAGCGGTATTCGGAATA
CCGTGCAATCAGATTGTTTCCTTTTGCAAGCAGGGGATAAACGAACGCTTTTTTCATTTTTTAATGTAGGAAGTTTAAAA
TTAAAAGATATCTCTTCTTTGAGTGCTTGTGGAGATAAGTAA
ATGAATGTAAAAGGTTTTACATTGCTTGAATCATTGATTTCATTATTAATTTTAAGCATATTACTATTAATGGCACTGCC
TATTTGGCAACAAAATCATAATGAAGCAGTGCTTGAAAAAGAGCAGCATAGGCTTTATCTTTTTTTACGTTATATTCAAA
GTAGAGTCGAAAACTCTAATGACATATGGTTTTTAGTCGCAAATCGTGATCTCCTTAGCAAGAAATGGTGTATTTCTGCT
CAAATAAAACAAGATAAAATCTGTAATTGTTTACAGCCCCAATATTGTTCCAATGAATTAATGGTTAATATTTATACGCC
GATGTTCCCGCAAGAAACAATGATTATAAGTAAAAACTATTATCCTAAAGAAATGGCAAGACTGAGCGGTATTCGGAATA
CCGTGCAATCAGATTGTTTCCTTTTGCAAGCAGGGGATAAACGAACGCTTTTTTCATTTTTTAATGTAGGAAGTTTAAAA
TTAAAAGATATCTCTTCTTTGAGTGCTTGTGGAGATAAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comN | Haemophilus influenzae Rd KW20 |
51.786 |
97.11 |
0.503 |