Detailed information    

insolico Bioinformatically predicted

Overview

Name   agrA   Type   Regulator
Locus tag   SaO267_RS11350 Genome accession   NZ_CP034102
Coordinates   2147645..2148361 (+) Length   238 a.a.
NCBI ID   WP_000688492.1    Uniprot ID   A0A7U7IEW1
Organism   Staphylococcus aureus strain O267     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2142645..2153361
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SaO267_RS11320 (SaO267_02079) - 2142903..2143529 (+) 627 WP_000522380.1 nitroreductase family protein -
  SaO267_RS11325 (SaO267_02080) - 2143849..2144634 (+) 786 WP_000867953.1 carbon-nitrogen family hydrolase -
  SaO267_RS11330 hld 2145233..2145313 (-) 81 WP_000046023.1 delta-hemolysin -
  SaO267_RS11335 (SaO267_02081) agrB 2145603..2146172 (+) 570 WP_001105714.1 accessory gene regulator AgrB -
  SaO267_RS11340 (SaO267_02082) - 2146169..2146309 (+) 141 WP_001093929.1 cyclic lactone autoinducer peptide -
  SaO267_RS11345 - 2146334..2147626 (+) 1293 WP_031844950.1 GHKL domain-containing protein -
  SaO267_RS11350 (SaO267_02084) agrA 2147645..2148361 (+) 717 WP_000688492.1 LytTR family DNA-binding domain-containing protein Regulator
  SaO267_RS11355 - 2148433..2148540 (+) 108 WP_041204320.1 hypothetical protein -
  SaO267_RS11360 (SaO267_02085) - 2148728..2149687 (-) 960 WP_001253306.1 carbohydrate kinase -
  SaO267_RS11365 (SaO267_02086) - 2149684..2151168 (-) 1485 WP_000141421.1 glycoside hydrolase family 32 protein -
  SaO267_RS11370 (SaO267_02087) - 2151317..2152267 (-) 951 WP_000790321.1 LacI family DNA-binding transcriptional regulator -

Sequence

Protein


Download         Length: 238 a.a.        Molecular weight: 27905.90 Da        Isoelectric Point: 6.0927

>NTDB_id=329023 SaO267_RS11350 WP_000688492.1 2147645..2148361(+) (agrA) [Staphylococcus aureus strain O267]
MKIFICEDDPKQRENMVTIIKNYIMIEEKPMEIALATDNPYEVLEQAKNMNDIGCYFLDIQLSTDINGIKLGSEIRKHDP
VGNIIFVTSHSELTYLTFVYKVAAMDFIFKDDPAELRTRIIDCLETAHTRLQLLSKDNSVETIELKRGSNSVYVQYDDIM
FFESSTKSHRLIAHLDNRQIEFYGNLKELSQLDDRFFRCHNSFVVNRHNIESIDSKERIVYFKNKEHCYASVRNVKKI

Nucleotide


Download         Length: 717 bp        

>NTDB_id=329023 SaO267_RS11350 WP_000688492.1 2147645..2148361(+) (agrA) [Staphylococcus aureus strain O267]
ATGAAAATTTTCATTTGCGAAGACGATCCAAAACAAAGAGAAAACATGGTTACCATTATTAAAAATTATATAATGATAGA
AGAAAAGCCTATGGAAATTGCCCTCGCAACTGATAATCCTTATGAGGTGCTTGAGCAAGCTAAAAATATGAATGACATAG
GCTGTTACTTTTTAGATATTCAACTTTCAACTGATATTAATGGTATCAAATTAGGCAGTGAAATTCGTAAGCATGACCCC
GTTGGTAACATTATATTTGTTACGAGTCACAGTGAACTTACCTATTTAACTTTTGTCTACAAAGTTGCAGCGATGGATTT
TATTTTTAAAGATGATCCAGCTGAATTAAGAACTCGAATTATAGACTGTTTAGAAACTGCACATACACGCTTACAATTGT
TGTCTAAAGATAATAGCGTTGAAACGATTGAATTAAAACGTGGCAGTAATTCAGTGTATGTTCAATATGATGATATTATG
TTTTTTGAATCATCAACAAAATCTCACAGACTCATTGCCCATTTAGATAACCGTCAAATTGAATTTTATGGTAATTTAAA
AGAACTGAGTCAATTAGATGATCGTTTCTTTAGATGTCATAATAGCTTTGTCGTCAATCGCCATAATATTGAATCTATAG
ATTCGAAAGAGCGAATTGTCTATTTTAAAAATAAAGAACACTGCTATGCATCGGTGAGAAACGTTAAAAAAATATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(3-120)

LytTr DNA-binding domain (LytTR)

(151-237)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7U7IEW1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  agrA Staphylococcus aureus N315

100

100

1

Multiple sequence alignment