Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | EHQ78_RS17765 | Genome accession | NZ_CP034090 |
| Coordinates | 3819337..3819861 (-) | Length | 174 a.a. |
| NCBI ID | WP_004249162.1 | Uniprot ID | A0A1Z1SRL1 |
| Organism | Proteus mirabilis strain PmSC1111 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 3814337..3824861
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EHQ78_RS17740 (EHQ78_17740) | lexA | 3814589..3815200 (+) | 612 | WP_004245906.1 | transcriptional repressor LexA | - |
| EHQ78_RS17745 (EHQ78_17745) | zur | 3815385..3815915 (-) | 531 | WP_004245904.1 | zinc uptake transcriptional repressor Zur | - |
| EHQ78_RS20055 (EHQ78_17750) | - | 3816484..3817389 (-) | 906 | WP_020946338.1 | hypothetical protein | - |
| EHQ78_RS17755 (EHQ78_17755) | - | 3817374..3818498 (-) | 1125 | WP_020946337.1 | type IV toxin-antitoxin system AbiEi family antitoxin | - |
| EHQ78_RS20060 | - | 3818738..3819028 (-) | 291 | WP_234410680.1 | hypothetical protein | - |
| EHQ78_RS17765 (EHQ78_17765) | ssb | 3819337..3819861 (-) | 525 | WP_004249162.1 | single-stranded DNA-binding protein SSB1 | Machinery gene |
| EHQ78_RS17770 (EHQ78_17770) | uvrA | 3820114..3822948 (+) | 2835 | WP_004249165.1 | excinuclease ABC subunit UvrA | - |
Sequence
Protein
Download Length: 174 a.a. Molecular weight: 18830.90 Da Isoelectric Point: 4.9468
>NTDB_id=328840 EHQ78_RS17765 WP_004249162.1 3819337..3819861(-) (ssb) [Proteus mirabilis strain PmSC1111]
MASRGVNKVILIGNLGQDPEIRYMPSGGAVANLTLATSESWRDKQTGEMKEKTEWHRVVIFGKLAEIAGEYLRKGSQVYI
EGQLQTRKWQDQSGQDRYSTEVVVNIGGTMQMLGGRGGQDNAPSQGQGGWGQPQQPQASQQFSGGAPSRPAQQPAAAPAP
SNEPPMDFDDDIPF
MASRGVNKVILIGNLGQDPEIRYMPSGGAVANLTLATSESWRDKQTGEMKEKTEWHRVVIFGKLAEIAGEYLRKGSQVYI
EGQLQTRKWQDQSGQDRYSTEVVVNIGGTMQMLGGRGGQDNAPSQGQGGWGQPQQPQASQQFSGGAPSRPAQQPAAAPAP
SNEPPMDFDDDIPF
Nucleotide
Download Length: 525 bp
>NTDB_id=328840 EHQ78_RS17765 WP_004249162.1 3819337..3819861(-) (ssb) [Proteus mirabilis strain PmSC1111]
ATGGCGAGCAGAGGCGTTAACAAAGTTATTCTTATCGGTAATTTAGGGCAGGATCCAGAAATCCGTTATATGCCAAGTGG
TGGTGCAGTGGCAAATCTGACACTAGCAACTTCAGAAAGCTGGCGCGACAAACAAACCGGTGAAATGAAAGAGAAAACCG
AATGGCACCGTGTGGTCATTTTCGGCAAACTAGCAGAAATTGCTGGCGAGTATCTGCGTAAAGGTTCACAAGTTTATATT
GAAGGTCAATTACAAACACGTAAATGGCAAGATCAAAGTGGTCAAGATCGCTACAGCACTGAAGTTGTGGTGAATATCGG
TGGCACAATGCAGATGTTAGGTGGCCGTGGTGGTCAAGATAATGCGCCTTCACAAGGCCAAGGCGGTTGGGGTCAACCTC
AGCAACCACAAGCATCACAACAGTTTAGTGGTGGCGCACCATCTCGCCCAGCACAACAACCAGCAGCGGCACCAGCGCCA
AGTAATGAACCACCAATGGACTTTGATGACGATATTCCGTTCTAG
ATGGCGAGCAGAGGCGTTAACAAAGTTATTCTTATCGGTAATTTAGGGCAGGATCCAGAAATCCGTTATATGCCAAGTGG
TGGTGCAGTGGCAAATCTGACACTAGCAACTTCAGAAAGCTGGCGCGACAAACAAACCGGTGAAATGAAAGAGAAAACCG
AATGGCACCGTGTGGTCATTTTCGGCAAACTAGCAGAAATTGCTGGCGAGTATCTGCGTAAAGGTTCACAAGTTTATATT
GAAGGTCAATTACAAACACGTAAATGGCAAGATCAAAGTGGTCAAGATCGCTACAGCACTGAAGTTGTGGTGAATATCGG
TGGCACAATGCAGATGTTAGGTGGCCGTGGTGGTCAAGATAATGCGCCTTCACAAGGCCAAGGCGGTTGGGGTCAACCTC
AGCAACCACAAGCATCACAACAGTTTAGTGGTGGCGCACCATCTCGCCCAGCACAACAACCAGCAGCGGCACCAGCGCCA
AGTAATGAACCACCAATGGACTTTGATGACGATATTCCGTTCTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Vibrio cholerae strain A1552 |
71.892 |
100 |
0.764 |
| ssb | Glaesserella parasuis strain SC1401 |
57.065 |
100 |
0.603 |
| ssb | Neisseria meningitidis MC58 |
48.023 |
100 |
0.489 |
| ssb | Neisseria gonorrhoeae MS11 |
48.023 |
100 |
0.489 |