Detailed information NTG0328704

Bioinformatically predicted

Overview

• Name: comEC/comE3
• Type: Machinery gene
• Locus tag: EHU52_RS07030
• Genome accession: NZ_CP034071
• Coordinates: 1436121..1437434 (-)
• Length: 437 a.a.
• NCBI ID: WP_164471960.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain Hpbs1
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1431121..1442434

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EHU52_RS07000	nadC	1431584..1432405 (-)	822	WP_096415522.1	carboxylating nicotinate-nucleotide diphosphorylase	-
EHU52_RS07005	nadA	1432405..1433415 (-)	1011	WP_124733581.1	quinolinate synthase NadA	-
EHU52_RS07010	-	1433402..1434208 (-)	807	WP_124733582.1	phosphatidylserine decarboxylase	-
EHU52_RS07015	-	1434205..1434708 (-)	504	WP_000953102.1	hypothetical protein	-
EHU52_RS07020	-	1434721..1435215 (-)	495	WP_000544981.1	hypothetical protein	-
EHU52_RS07025	mqnP	1435208..1436092 (-)	885	WP_124733584.1	menaquinone biosynthesis prenyltransferase MqnP	-
EHU52_RS07030	comEC/comE3	1436121..1437434 (-)	1314	WP_164471960.1	ComEC/Rec2 family competence protein	Machinery gene
EHU52_RS07035	-	1437431..1438891 (-)	1461	WP_124733585.1	replicative DNA helicase	-
EHU52_RS07040	-	1438902..1440296 (-)	1395	WP_124733586.1	NAD(P)H-hydrate dehydratase	-
EHU52_RS07045	crdS	1440299..1441501 (-)	1203	WP_124733587.1	copper-sensing histidine kinase CrdS	-
EHU52_RS07050	crdR	1441467..1442108 (-)	642	WP_124733588.1	copper response regulator transcription factor CrdR	-

Sequence

Protein

• Length: 437 a.a.
• Molecular weight: 50058.91 Da
• Isoelectric Point: 9.9598

>NTDB_id=328704 EHU52_RS07030 WP_164471960.1 1436121..1437434(-) (comEC/comE3) [Helicobacter pylori strain Hpbs1]
MKDKTFQGAFELLTTPKEYLLCGVILSLLLAFNLYLEYLNYQKFDFSKPTSLNAQILLQYPKTKDQKTYFVLKLQSKGII
FYTTIKEPLKNLQYRHAQFFGKIKSCSFLESLKSCFFQTYSFSLTRKQDFKSHWRRFIDSAHSSALVGNLYRALFIGDSL
NKDLRDRANALGINHLLAISGFHLGILSASVYFLFSLFYAPLQKRYFPYRNAFYDIGVLVWVFLLGYLLLLGFLPSFFRA
FLMGLLGFLACFFGVRLLSFKLLILACCIAIALLPKLLFSVGFLLSVCGVWYIFLFLKHTQAFFKTSSFLARSFQVISLS
VLVFLNMLIIAHAFFPMFSPYQLFSIPLGLIFIVFFPLSLFLHAVGLGSLLDGILNMPLTIPTIFVSSPLWLLGAHLFLT
ILSARFFKVYLSMNVLSTGFFLYCCYQYIIMPSSIVG

Nucleotide

• Length: 1314 bp

>NTDB_id=328704 EHU52_RS07030 WP_164471960.1 1436121..1437434(-) (comEC/comE3) [Helicobacter pylori strain Hpbs1]
TTGAAAGATAAAACTTTTCAGGGGGCGTTTGAACTTCTTACAACCCCCAAAGAATACTTGTTGTGTGGGGTTATTTTAAG
TCTTTTGTTGGCGTTTAATCTTTATTTAGAATATTTGAATTACCAAAAGTTTGATTTTTCAAAACCTACAAGCCTGAACG
CTCAAATCTTGTTGCAATACCCCAAAACTAAAGATCAAAAAACCTATTTTGTTTTAAAGCTCCAATCAAAGGGCATAATC
TTTTACACCACCATTAAAGAGCCTTTAAAAAACCTCCAATACCGCCACGCGCAATTTTTTGGCAAAATCAAATCTTGCTC
GTTTTTGGAGTCTTTAAAATCATGCTTTTTTCAAACTTATTCGTTTTCTTTAACACGAAAACAAGATTTCAAATCGCATT
GGCGCCGTTTCATTGACAGCGCTCATTCAAGTGCTTTAGTGGGTAATTTGTATCGAGCGTTGTTTATAGGGGATAGCTTG
AATAAAGACTTAAGAGATAGGGCTAACGCGCTAGGGATCAACCACTTACTAGCCATTAGCGGATTCCATTTAGGGATTTT
GAGCGCGAGCGTGTATTTCCTTTTCTCTCTTTTTTATGCCCCCTTACAAAAACGCTATTTCCCTTATAGGAACGCTTTTT
ATGATATAGGGGTTTTGGTGTGGGTTTTTTTGCTAGGGTATTTATTGCTATTAGGTTTTTTACCCTCTTTTTTCAGGGCG
TTTTTAATGGGCTTGTTAGGGTTTTTGGCATGCTTTTTTGGGGTAAGGCTTTTGAGTTTTAAACTTTTGATTTTAGCGTG
CTGTATCGCTATAGCGTTACTCCCTAAATTGCTTTTTAGCGTGGGGTTTTTGCTTTCTGTTTGTGGGGTGTGGTATATCT
TTTTGTTTTTAAAACACACTCAAGCCTTTTTTAAAACCTCTTCTTTTTTGGCGCGATCTTTTCAGGTCATAAGCTTAAGC
GTATTGGTGTTTTTGAACATGCTCATCATTGCGCATGCCTTTTTCCCTATGTTTTCGCCCTACCAACTCTTTAGCATTCC
TTTAGGCTTGATTTTTATCGTGTTTTTCCCTTTGAGTTTGTTCTTGCATGCTGTGGGTTTGGGGTCTTTGTTGGATGGTA
TTTTAAACATGCCTTTAACAATCCCTACGATTTTTGTTTCTTCGCCTTTATGGCTTTTGGGGGCACATTTATTTTTAACG
ATTTTGAGTGCGCGTTTTTTTAAAGTTTATTTAAGCATGAATGTTTTAAGCACGGGCTTTTTCTTGTATTGTTGCTATCA
ATATATTATAATGCCTAGCTCAATTGTAGGTTAG

Domains

Predicted by InterproScan.

• Competence protein (Competence) (159-372)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC/comE3	Helicobacter pylori 26695	93.593	100	0.936